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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 4
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 36.58 98.83
TraesCS7D01G213900.1 Wheat plasma membrane 98.48 98.7
TraesCS7A01G212200.2 Wheat plasma membrane 98.48 98.7
TraesCS7B01G119000.2 Wheat plasma membrane 97.84 98.05
Os06t0275800-01 Rice plasma membrane 85.93 88.62
EER88229 Sorghum plasma membrane 85.93 86.49
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 65.8 75.81
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 74.03 73.87
HORVU6Hr1G072350.1 Barley plasma membrane 69.26 71.43
VIT_14s0083g00740.t01 Wine grape plasma membrane 68.61 68.61
Solyc02g089400.2.1 Tomato plasma membrane 67.53 67.83
Zm00001d045740_P001 Maize plasma membrane 84.85 67.7
PGSC0003DMT400068294 Potato plasma membrane 66.23 66.09
CDX86347 Canola plasma membrane 65.15 65.43
HORVU6Hr1G034900.1 Barley peroxisome 64.94 65.36
CDY35776 Canola plasma membrane 64.72 65.28
Solyc02g065680.2.1 Tomato plasma membrane 65.37 65.23
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 64.94 65.22
CDY45907 Canola plasma membrane 64.94 65.22
AT3G30390.2 Thale cress plasma membrane 64.72 65.0
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 64.94 64.94
Bra020737.1-P Field mustard plasma membrane 64.5 64.92
Bra036198.1-P Field mustard plasma membrane 63.42 64.25
CDY67720 Canola plasma membrane 63.64 64.19
CDY00078 Canola plasma membrane 63.2 63.76
PGSC0003DMT400003740 Potato plasma membrane 66.45 63.69
CDX74504 Canola plasma membrane 44.81 63.69
CDY37894 Canola plasma membrane 62.12 63.36
KRG93742 Soybean plasma membrane 63.42 63.28
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 39.83 63.23
AT5G38820.2 Thale cress plasma membrane 62.99 63.12
KRH01440 Soybean plasma membrane 63.42 63.01
KRH45158 Soybean plasma membrane 63.2 62.66
Bra014071.1-P Field mustard plasma membrane 58.66 60.63
CDY17030 Canola plasma membrane 58.44 59.87
KRH18319 Soybean plasma membrane 59.96 59.57
HORVU7Hr1G092550.1 Barley cytosol 66.67 59.46
CDY47589 Canola plasma membrane 58.01 59.29
KRG93745 Soybean plasma membrane 59.09 58.84
KRH54971 Soybean plasma membrane 58.87 57.87
CDX67416 Canola plasma membrane 54.98 57.73
CDY49071 Canola plasma membrane 54.76 57.63
Bra028420.1-P Field mustard plasma membrane 54.11 56.82
HORVU3Hr1G088360.1 Barley peroxisome, plasma membrane 48.48 47.86
HORVU3Hr1G045630.2 Barley plastid 45.89 44.54
HORVU7Hr1G115450.1 Barley cytosol, peroxisome, plastid 39.61 28.37
Protein Annotations
EnsemblPlants:HORVU7Hr1G065280.2EnsemblPlantsGene:HORVU7Hr1G065280GO:GO:0005575GO:GO:0016020InterPro:AA_transpt_TMPANTHER:PTHR22950
PANTHER:PTHR22950:SF270PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI0002958BF8UniProt:M0XCZ8
MapMan:24.2.3.4.7:::::
Description
No Description!
Coordinates
chrchr7H:+:324264552..324268028
Molecular Weight (calculated)
49774.1 Da
IEP (calculated)
7.341
GRAVY (calculated)
0.723
Length
462 amino acids
Sequence
(BLAST)
001: MTTGAVAGSF PESSEPLLPT KRRWEGEDGG GGDEAAFHEF NGASFAGAVF NLSTTIVGAG IMALPATMKV LGLVPGLVMI VLAAFLTDAS VELLMRFSRV
101: VGAPSYGAVM GDAFGWWGRR LLQVCVVVNN VGVMIVYMII IGDVLSGTSS GGEHHYGVLE GWFGTRWWNG RFFVLLVTTL GVFTPLACFK RVDSLSYTSA
201: ISVALAVVFV VITAGIAIVK LIRGQILMPK LFPAVPDLAS VWELFTAVPV LVTAYVCHYN VHPIHNELKE SSQIKPIVHT SLALCSTVYI TTSFFGYLLF
301: GESTLADVLA NFDSNLGIPY SSVLSDAVRV SYAIHLMLVF PMIFHALRLN LDGLLFSSAR PLSSDNRRFG VMTAVLLLVI FISANFIPSI WDAFQFTGAT
401: AAVCIAFIFP AAITLRDPHS VAKKWDKILA IFMIVLAVTS NVVAVYSDAY SIFHKKSASS NA
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.