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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45907 Canola plasma membrane 99.56 99.35
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 91.72 91.52
AT3G30390.2 Thale cress plasma membrane 87.58 87.39
Bra036198.1-P Field mustard plasma membrane 86.71 87.28
Solyc02g089400.2.1 Tomato plasma membrane 72.55 72.39
VIT_14s0083g00740.t01 Wine grape plasma membrane 71.9 71.43
PGSC0003DMT400068294 Potato plasma membrane 70.37 69.76
Bra014071.1-P Field mustard plasma membrane 66.88 68.68
Solyc02g065680.2.1 Tomato plasma membrane 69.06 68.47
PGSC0003DMT400003740 Potato plasma membrane 71.46 68.05
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 59.26 67.83
KRH01440 Soybean plasma membrane 67.97 67.1
KRG93742 Soybean plasma membrane 67.32 66.74
KRH45158 Soybean plasma membrane 67.54 66.52
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 66.01 65.44
TraesCS7A01G212200.2 Wheat plasma membrane 65.14 64.86
TraesCS7B01G119000.2 Wheat plasma membrane 64.92 64.64
TraesCS7D01G213900.1 Wheat plasma membrane 64.92 64.64
Bra028420.1-P Field mustard plasma membrane 61.87 64.55
HORVU7Hr1G065280.2 Barley plasma membrane 64.92 64.5
HORVU6Hr1G072350.1 Barley plasma membrane 62.75 64.29
Os02t0727100-01 Rice plasma membrane 62.53 64.06
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 23.75 63.74
Os06t0275800-01 Rice plasma membrane 61.87 63.39
Os06t0633800-01 Rice peroxisome 63.18 63.32
EER88229 Sorghum plasma membrane 63.18 63.18
TraesCS6A01G288200.1 Wheat plasma membrane 61.66 63.17
TraesCS6B01G317700.1 Wheat plasma membrane 61.22 63.15
TraesCS6D01G270800.1 Wheat plasma membrane 61.0 62.92
TraesCS7A01G391600.1 Wheat plasma membrane 62.75 62.88
TraesCS7D01G387200.1 Wheat plasma membrane 62.75 62.88
EER88687 Sorghum cytosol, peroxisome, plasma membrane 62.75 62.75
TraesCS7B01G293500.3 Wheat plasma membrane 62.53 62.66
TraesCS6B01G198900.1 Wheat peroxisome 62.09 62.23
TraesCS6A01G170700.1 Wheat plasma membrane 62.09 62.23
TraesCS6D01G160400.1 Wheat peroxisome 61.87 62.01
HORVU6Hr1G034900.1 Barley peroxisome 61.66 61.66
Zm00001d015658_P001 Maize plasma membrane 60.57 61.64
KXG29680 Sorghum plasma membrane 60.78 61.32
KRH18319 Soybean plasma membrane 62.09 61.29
KRG93745 Soybean plasma membrane 61.66 60.99
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 62.53 60.42
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 59.7 59.7
Zm00001d051703_P001 Maize plasma membrane 63.18 59.43
HORVU7Hr1G092550.1 Barley cytosol 61.44 54.44
KXG30838 Sorghum plasma membrane 62.31 51.62
Zm00001d045740_P001 Maize plasma membrane 62.75 49.74
Bra007225.1-P Field mustard plasma membrane 42.48 44.93
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 27.89 43.99
Bra017005.1-P Field mustard plastid 41.39 42.79
Bra003570.1-P Field mustard cytosol 41.61 41.43
Bra007226.1-P Field mustard plasma membrane 37.25 40.91
Bra008469.1-P Field mustard plasma membrane 41.39 39.42
Bra035175.1-P Field mustard plasma membrane 41.39 39.26
Protein Annotations
EnsemblPlants:Bra020737.1EnsemblPlants:Bra020737.1-PEnsemblPlantsGene:Bra020737GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF270PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002546139UniProt:M4DW43MapMan:24.2.3.4.7:::
Description
AT3G30390 (E=6e-206) | amino acid transporter family protein
Coordinates
chrA02:-:23407081..23409263
Molecular Weight (calculated)
49487.7 Da
IEP (calculated)
7.100
GRAVY (calculated)
0.658
Length
459 amino acids
Sequence
(BLAST)
001: MDDASPSQRR SSGSSSSNDV AAPLLPKSQG EEVAAYDEFN GASFSGAVFN LSTTIIGAGI MALPATMKIL GLVLGIAMIV VMAFLTDASI EFLLRFSKIK
101: RSRSYGGLMG DSFGKPGKVL LQVAVLVNNI GVLIVYMIII GDVLAGKTED GTHHHGVLEG WFGHHWWNGR AFVLLITTLG VFAPLACFKR IDSLRFTSAL
201: SVALAVVFLV ITAGISIMKL ISGGVAMPRL LPDVSDLTSF WNLFTVVPVL VTAFICHYNV HSIQNELDDP SQIRPVVRSA LMLCSSVYIM TSIFGFLLFG
301: DDTLDDVLAN FDTDLGIPFG SVLNDAVRVS YALHLMLVFP IVFYPLRINI DGLFFPSSPS LTSSNVRFGC LSASLITVIF LGANFIPSIW DAFQFTGATA
401: AVCLGFIFPA SVILKDRHSR ATGRDTTLAV FMIVLAVMSN AVAIYSDAYA LFKKHTHRG
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.