CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 4
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051703_P001	Maize	plasma membrane	81.95	93.03
Os02t0727100-01	Rice	plasma membrane	64.26	79.46
TraesCS6B01G317700.1	Wheat	plasma membrane	62.09	77.3
TraesCS6D01G270800.1	Wheat	plasma membrane	62.09	77.3
HORVU6Hr1G072350.1	Barley	plasma membrane	62.09	76.79
TraesCS6A01G288200.1	Wheat	plasma membrane	61.91	76.56
EER88229	Sorghum	plasma membrane	57.58	69.5
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	50.0	69.08
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	55.96	66.95
PGSC0003DMT400068294	Potato	plasma membrane	53.43	63.93
CDX86347	Canola	plasma membrane	53.07	63.91
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	53.07	63.91
Solyc02g089400.2.1	Tomato	plasma membrane	52.89	63.7
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	53.07	63.64
VIT_14s0083g00740.t01	Wine grape	plasma membrane	52.71	63.2
AT3G30390.2	Thale cress	plasma membrane	52.35	63.04
CDY35776	Canola	plasma membrane	51.81	62.66
Solyc02g065680.2.1	Tomato	plasma membrane	52.35	62.63
CDY45907	Canola	plasma membrane	51.81	62.39
Bra020737.1-P	Field mustard	plasma membrane	51.62	62.31
KXG29680	Sorghum	plasma membrane	51.08	62.2
CDY00078	Canola	plasma membrane	51.08	61.79
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	51.08	61.66
Bra036198.1-P	Field mustard	plasma membrane	50.72	61.62
CDY67720	Canola	plasma membrane	50.72	61.35
KRH01440	Soybean	plasma membrane	51.26	61.08
CDX74504	Canola	plasma membrane	35.56	60.62
KRH45158	Soybean	plasma membrane	50.54	60.09
CDY37894	Canola	plasma membrane	49.1	60.04
PGSC0003DMT400003740	Potato	plasma membrane	52.17	59.96
KRG93742	Soybean	plasma membrane	49.1	58.75
KRG93745	Soybean	plasma membrane	48.38	57.76
AT5G38820.2	Thale cress	plasma membrane	48.01	57.7
KRH18319	Soybean	plasma membrane	48.19	57.42
KRH54971	Soybean	plasma membrane	47.65	56.17
Bra014071.1-P	Field mustard	plasma membrane	44.58	55.26
CDY17030	Canola	plasma membrane	44.58	54.77
CDY47589	Canola	plasma membrane	44.04	53.98
CDY49071	Canola	plasma membrane	41.7	52.62
CDX67416	Canola	plasma membrane	41.34	52.05
Bra028420.1-P	Field mustard	plasma membrane	40.79	51.36
KXG33635	Sorghum	plasma membrane	37.55	44.73
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	31.95	36.57

Protein Annotations

EnsemblPlants:KXG30838	EnsemblPlantsGene:SORBI_3004G253200	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF270	PFAM:PF01490	ProteinID:KXG30838	ProteinID:KXG30838.1	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0007F23116	UniProt:A0A194YRI0	MapMan:24.2.3.4.7	:

Description

hypothetical protein

Coordinates

chr4:+:59901712..59904227

Molecular Weight (calculated)

59653.2 Da

IEP (calculated)

9.338

GRAVY (calculated)

0.464

Length

554 amino acids

Sequence
(BLAST)

001: MAMLSILLNW GGTLLLIIRR LVSSDQKLLH IHSTPPNSSS PHALHQKSER RSAPIHPYMR EDTRISVQRG AGGNWKLEFR PRRPHRPSYD EPGFGGALAR
101: MVMPISSGGD HHHAAAAGGE GAEPLLPEKQ RGGGGADDAG DDFHGASFSG AVFNLSTTIV GAGIMALPAT MKVLGLVPGL VLIVLAALLT DASVDLLVRF
201: NRAAGVRTYA KTMGDAFGVL GRGLLQLCVI VNNLGILVVY MIIIGDVLSG TSSSGVHHHG VLEGWFGANR WNGRFAILAI ATLGVFTPLA CVKHVDSLRY
301: TSALSVALAV VFVVITAGIA MFKLARGQIP MPRLFPDIHD WPSIWRLFTA APVLVTAYIC HYNVLPICKE LKDSAQIRPI VRTSLLLCSA VYITTSFFGF
401: LLFGDSTLDD VLANFDSNLG IPYSSLFNDA VRVSYVLHLM LVFPIVFQAL RLNMDGLLFP SARPLSCDNR RFGGLTAALL AVIFLAANFI PNIWDAFQFT
501: GATASVCVAY IFPAAITLRD RHGIARKRDK SLALFMIVLA VVANAVAVYS DACS

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.