Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74504 | Canola | plasma membrane | 68.21 | 95.08 |
| AT5G38820.2 | Thale cress | plasma membrane | 82.34 | 80.91 |
| CDY47589 | Canola | plasma membrane | 79.03 | 79.2 |
| CDY17030 | Canola | plasma membrane | 78.59 | 78.94 |
| CDY49071 | Canola | plasma membrane | 72.63 | 74.94 |
| CDX86347 | Canola | plasma membrane | 75.94 | 74.78 |
| CDX85291 | Canola | mitochondrion, peroxisome, plasma membrane | 76.16 | 74.68 |
| CDY35776 | Canola | plasma membrane | 75.5 | 74.67 |
| CDX67416 | Canola | plasma membrane | 71.96 | 74.09 |
| CDY45907 | Canola | plasma membrane | 75.06 | 73.91 |
| CDY00078 | Canola | plasma membrane | 73.73 | 72.93 |
| CDY67720 | Canola | plasma membrane | 73.29 | 72.49 |
| VIT_14s0083g00740.t01 | Wine grape | plasma membrane | 70.86 | 69.48 |
| Solyc02g089400.2.1 | Tomato | plasma membrane | 69.76 | 68.7 |
| PGSC0003DMT400068294 | Potato | plasma membrane | 69.54 | 68.03 |
| Solyc02g065680.2.1 | Tomato | plasma membrane | 68.87 | 67.39 |
| KRH45158 | Soybean | plasma membrane | 69.32 | 67.38 |
| KRH01440 | Soybean | plasma membrane | 68.87 | 67.1 |
| GSMUA_Achr7P20080_001 | Banana | extracellular, plasma membrane, vacuole | 57.84 | 65.34 |
| KRG93742 | Soybean | plasma membrane | 66.0 | 64.58 |
| HORVU0Hr1G020180.1 | Barley | cytosol, plasma membrane | 24.28 | 64.33 |
| PGSC0003DMT400003740 | Potato | plasma membrane | 67.99 | 63.9 |
| GSMUA_Achr8P24480_001 | Banana | cytosol, golgi, plasma membrane | 64.46 | 63.07 |
| TraesCS7A01G212200.2 | Wheat | plasma membrane | 63.36 | 62.26 |
| HORVU7Hr1G065280.2 | Barley | plasma membrane | 63.36 | 62.12 |
| TraesCS7D01G213900.1 | Wheat | plasma membrane | 63.13 | 62.04 |
| TraesCS7B01G119000.2 | Wheat | plasma membrane | 62.91 | 61.82 |
| Os06t0633800-01 | Rice | peroxisome | 62.47 | 61.79 |
| TraesCS7D01G387200.1 | Wheat | plasma membrane | 62.47 | 61.79 |
| TraesCS7A01G391600.1 | Wheat | plasma membrane | 62.25 | 61.57 |
| TraesCS7B01G293500.3 | Wheat | plasma membrane | 62.25 | 61.57 |
| EER88687 | Sorghum | cytosol, peroxisome, plasma membrane | 62.25 | 61.44 |
| Os06t0275800-01 | Rice | plasma membrane | 60.49 | 61.16 |
| Os02t0727100-01 | Rice | plasma membrane | 60.49 | 61.16 |
| EER88229 | Sorghum | plasma membrane | 61.81 | 61.0 |
| Zm00001d015658_P001 | Maize | plasma membrane | 60.49 | 60.75 |
| TraesCS6A01G170700.1 | Wheat | plasma membrane | 61.37 | 60.7 |
| KXG29680 | Sorghum | plasma membrane | 60.93 | 60.66 |
| TraesCS6B01G198900.1 | Wheat | peroxisome | 61.15 | 60.48 |
| TraesCS6D01G160400.1 | Wheat | peroxisome | 61.15 | 60.48 |
| HORVU6Hr1G034900.1 | Barley | peroxisome | 61.15 | 60.35 |
| TraesCS6A01G288200.1 | Wheat | plasma membrane | 59.38 | 60.04 |
| HORVU6Hr1G072350.1 | Barley | plasma membrane | 59.38 | 60.04 |
| TraesCS6B01G317700.1 | Wheat | plasma membrane | 58.94 | 60.0 |
| TraesCS6D01G270800.1 | Wheat | plasma membrane | 58.94 | 60.0 |
| Zm00001d046661_P003 | Maize | golgi, peroxisome, plasma membrane | 62.47 | 59.58 |
| KRG93745 | Soybean | plasma membrane | 60.93 | 59.48 |
| Os02t0191300-01 | Rice | cytosol, peroxisome, plasma membrane | 60.26 | 59.48 |
| KRH18319 | Soybean | plasma membrane | 60.93 | 59.35 |
| Zm00001d051703_P001 | Maize | plasma membrane | 60.93 | 56.56 |
| HORVU7Hr1G092550.1 | Barley | cytosol | 61.81 | 54.05 |
| Zm00001d045740_P001 | Maize | plasma membrane | 62.91 | 49.22 |
| KXG30838 | Sorghum | plasma membrane | 60.04 | 49.1 |
| CDY27235 | Canola | plasma membrane | 39.07 | 43.6 |
| CDY27236 | Canola | plasma membrane | 41.28 | 43.09 |
| CDX72159 | Canola | plasma membrane | 40.84 | 42.63 |
| CDY52929 | Canola | plastid | 40.62 | 41.35 |
| CDY27234 | Canola | plasma membrane | 41.28 | 41.19 |
| HORVU0Hr1G020160.1 | Barley | golgi, mitochondrion | 26.05 | 40.55 |
| CDY66186 | Canola | plasma membrane, plastid | 40.62 | 40.44 |
| CDX79381 | Canola | plasma membrane | 40.4 | 39.61 |
| CDX67951 | Canola | plasma membrane | 40.62 | 39.23 |
| CDY39969 | Canola | plasma membrane | 41.06 | 38.43 |
| CDY38675 | Canola | plasma membrane | 40.84 | 38.38 |
| CDY37600 | Canola | cytosol, peroxisome, plasma membrane | 40.62 | 38.17 |
| CDX87318 | Canola | plasma membrane | 40.62 | 38.02 |
Protein Annotations
| EnsemblPlants:CDY37894 | EnsemblPlantsGene:GSBRNA2T00064877001 | GO:A0A078HKP4 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF292 | PFAM:PF01490 | ProteinID:CDY37894 | ProteinID:CDY37894.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EC6DBC | UniProt:A0A078HKP4 | MapMan:24.2.3.4.7 | : |
Description
BnaC04g31120DBnaC04g31120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKP4]
Coordinates
chrLK032410:-:340028..342309
Molecular Weight (calculated)
49435.9 Da
IEP (calculated)
7.251
GRAVY (calculated)
0.656
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIGDEIQKD NETAPLLPES GRDGEIGHDE FNGASFTGAV FNLATTIIGA GIMALPATMK ILGLVPGIAM IVLMAILTDS TIEFLLRFSR IGKTRSYGGL
101: MEDSFGKTGR TVLQFSVLVS NIGVLIVYMI IIGDVLAGKD EFGIHHAGIL EGWFGEYWWN TRTFVLLITT LLVFAPLTSF KRIDSLRFTS AISLALAVVF
201: LVITAGIVVT KFFSGGLMMP RLLPNVTDLS SFWRLFTVVP VLVNAYICHY NVHNIHNELE DATQIKPVVR SALTVCSSVY VMTSLFGYLL FGESTLDDVL
301: ANFDTDLKIP FGSVLNDAVR FSYAAHLMLV FPVVFYPLRV NIDGLLFPKA PSLTTSNLRF GSITAGLIAV IFVGANFIPS IWDAFQFTGA TASVCIGFIF
401: PAAVILKDRH NRATKRDKSL AIFVIVLAVF SNAIAIYSDA YALFKKNKST LAI
101: MEDSFGKTGR TVLQFSVLVS NIGVLIVYMI IIGDVLAGKD EFGIHHAGIL EGWFGEYWWN TRTFVLLITT LLVFAPLTSF KRIDSLRFTS AISLALAVVF
201: LVITAGIVVT KFFSGGLMMP RLLPNVTDLS SFWRLFTVVP VLVNAYICHY NVHNIHNELE DATQIKPVVR SALTVCSSVY VMTSLFGYLL FGESTLDDVL
301: ANFDTDLKIP FGSVLNDAVR FSYAAHLMLV FPVVFYPLRV NIDGLLFPKA PSLTTSNLRF GSITAGLIAV IFVGANFIPS IWDAFQFTGA TASVCIGFIF
401: PAAVILKDRH NRATKRDKSL AIFVIVLAVF SNAIAIYSDA YALFKKNKST LAI
001: MISGSMENLD EIRTDIVEST APLLQESSSE SNGGGEFNGA SFSGAVFNLA TTIIGAGIMA LPATMKILGL IPGITIIVLM AFLTDASIEF LLRFSNIGNQ
101: RSYGGVMDDS FGKCGRIMLQ VSILVSNIGV LIVYMIIIGD VLAGKNEYGI HHAGMLEGWF GISWWNRRTF VLLVTTLTVF APLTCFKRID SLRFTSAISV
201: ALAVVFLVIT AGITIIKLFT DGLMMPRLLP NVTDLSSFWK LFTVVPVLVN AYICHYNVHS IQNELEDPSR IKPVVRSALA MCSSVYVMTS LFGYLLFGDG
301: TLDDVLANFD TDLGIPFGSV LNDAVRFSYA AHLMLVFPVV FYPLRINIDG LIFPTAPPLT SSESDLRFGS ITAGLIAVIF LGANFIPSIW DAFQFTGATA
401: AVCIGFIFPA AVILKDRHNQ ATKRDKTIAI CMIVLAVFSN AIAIYSDAYA LFKKHTYVYP I
101: RSYGGVMDDS FGKCGRIMLQ VSILVSNIGV LIVYMIIIGD VLAGKNEYGI HHAGMLEGWF GISWWNRRTF VLLVTTLTVF APLTCFKRID SLRFTSAISV
201: ALAVVFLVIT AGITIIKLFT DGLMMPRLLP NVTDLSSFWK LFTVVPVLVN AYICHYNVHS IQNELEDPSR IKPVVRSALA MCSSVYVMTS LFGYLLFGDG
301: TLDDVLANFD TDLGIPFGSV LNDAVRFSYA AHLMLVFPVV FYPLRINIDG LIFPTAPPLT SSESDLRFGS ITAGLIAVIF LGANFIPSIW DAFQFTGATA
401: AVCIGFIFPA AVILKDRHNQ ATKRDKTIAI CMIVLAVFSN AIAIYSDAYA LFKKHTYVYP I
Arabidopsis Description
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.