Factsheet for Zm00001d045740_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88229	Sorghum	plasma membrane	75.3	94.99
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	25.56	86.55
TraesCS7A01G212200.2	Wheat	plasma membrane	68.22	85.68
TraesCS7D01G213900.1	Wheat	plasma membrane	68.05	85.47
Os06t0275800-01	Rice	plasma membrane	65.8	85.04
TraesCS7B01G119000.2	Wheat	plasma membrane	67.7	85.03
HORVU7Hr1G065280.2	Barley	plasma membrane	67.7	84.85
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	50.6	73.07
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	56.48	70.63
Zm00001d015658_P001	Maize	plasma membrane	52.16	66.96
VIT_14s0083g00740.t01	Wine grape	plasma membrane	53.37	66.88
Solyc02g089400.2.1	Tomato	plasma membrane	52.68	66.3
PGSC0003DMT400068294	Potato	plasma membrane	51.99	65.01
Solyc02g065680.2.1	Tomato	plasma membrane	51.81	64.79
Zm00001d051703_P001	Maize	plasma membrane	54.58	64.75
CDX86347	Canola	plasma membrane	50.78	63.91
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	52.33	63.79
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	50.6	63.7
AT3G30390.2	Thale cress	plasma membrane	50.43	63.48
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	50.6	63.42
CDX74504	Canola	plasma membrane	35.58	63.38
CDY00078	Canola	plasma membrane	50.09	63.32
CDY35776	Canola	plasma membrane	49.91	63.1
Bra036198.1-P	Field mustard	plasma membrane	49.57	62.94
CDY37894	Canola	plasma membrane	49.22	62.91
CDY45907	Canola	plasma membrane	49.91	62.83
Bra020737.1-P	Field mustard	plasma membrane	49.74	62.75
CDY67720	Canola	plasma membrane	49.57	62.66
PGSC0003DMT400003740	Potato	plasma membrane	51.81	62.24
KRH01440	Soybean	plasma membrane	49.57	61.72
AT5G38820.2	Thale cress	plasma membrane	48.88	61.39
KRH45158	Soybean	plasma membrane	49.22	61.16
KRG93742	Soybean	plasma membrane	48.7	60.91
Bra014071.1-P	Field mustard	plasma membrane	45.94	59.51
KRH18319	Soybean	plasma membrane	47.15	58.71
KRG93745	Soybean	plasma membrane	46.98	58.62
CDY17030	Canola	plasma membrane	45.25	58.09
CDY47589	Canola	plasma membrane	45.25	57.96
CDX67416	Canola	plasma membrane	43.87	57.73
CDY49071	Canola	plasma membrane	43.35	57.18
Bra028420.1-P	Field mustard	plasma membrane	43.18	56.82
KRH54971	Soybean	plasma membrane	45.94	56.6
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	27.46	54.64
Zm00001d046586_P001	Maize	plasma membrane	31.61	37.58
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	10.36	32.61
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	36.96	32.13

Protein Annotations

EnsemblPlants:Zm00001d045740_P001	EnsemblPlants:Zm00001d045740_T001	EnsemblPlantsGene:Zm00001d045740	Gene3D:1.10.510.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF270	PFAM:PF01490	ProteinID:AQL03088.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0008443CF6	UniProt:A0A1D6NYN7	MapMan:24.2.3.4.7	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr9:+:36283444..36288609

Molecular Weight (calculated)

62968.9 Da

IEP (calculated)

6.567

GRAVY (calculated)

0.557

Length

579 amino acids

Sequence
(BLAST)

001: MGGGAVNDHF PGASDPLLPT KRDGDGDEDD AGASAFHEFD GASFAGAVFN LSTTIVGAGI MALPATMKVL GLVPGLVMIV LAALLTDASI ELLVRFSRAA
101: GARSYSAAMA DAFGWWGRRL LQVCVVINNV GVMIVYMIII GDVLSGSTSG GEHHYGVLEG WFGIHWWNGR LFVLLVTTLC VFTPLACLKR IDSLSYTSTI
201: SVALAVVFVI ITAGIAVIKL IGGQIPMPKL FPTVSDLASV WELFTAVPVL VTAYVCHYNV HPIHNELKDS TQIKPIVHTS LTLCSTIYIT TSFFGYLLFG
301: ESTLSDVLSN FDSNLGIPYS SVLNDAVRVS YAVHLMLVFP MIFHALRLNL DGLLFASARP LSSDNRRFGI ITASLLLVIF GSAIFIPSIW DAFQFTGATA
401: AVCIAFIFPA AITLRDSQGI AKKWDKILAI FMIVLAVVSN VVAVYSDAYK IFNKESAPSN AWIGESTENR SSWWLVDTYD LYVIVHMMLH ELGMSVEKVP
501: KIGGGYNYQP KQPFIRYWNV DLWQKLFSND SVVAALQSLR GVFLGYMCSN RELVGKLIEL LAKQKASYTV AMSCDSPNV

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.