Factsheet for Zm00001d046586_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	94.66	95.25
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	83.78	85.53
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	82.34	81.67
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	80.9	81.07
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	81.72	81.06
KRH09698	Soybean	plasma membrane	59.14	68.74
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	61.4	66.74
Solyc03g117350.1.1	Tomato	plasma membrane	61.81	63.77
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.68	63.77
PGSC0003DMT400036836	Potato	plasma membrane	61.6	63.56
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	62.42	62.68
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	82.96	62.64
CDX79381	Canola	plasma membrane	58.52	61.69
CDX67951	Canola	plasma membrane	58.93	61.19
Bra003570.1-P	Field mustard	cytosol	57.91	61.17
CDY37600	Canola	cytosol, peroxisome, plasma membrane	59.96	60.58
Bra008469.1-P	Field mustard	plasma membrane	59.96	60.58
CDY38675	Canola	plasma membrane	59.55	60.17
CDX87318	Canola	plasma membrane	58.73	59.09
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	59.14	58.9
CDY39969	Canola	plasma membrane	58.32	58.68
Bra035175.1-P	Field mustard	plasma membrane	58.32	58.68
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	49.08	50.74
Zm00001d015658_P001	Maize	plasma membrane	34.29	37.03
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	35.93	36.84
Zm00001d051703_P001	Maize	plasma membrane	35.93	35.86
Zm00001d045740_P001	Maize	plasma membrane	37.58	31.61
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	10.06	26.63
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	33.26	24.32

Protein Annotations

EntrezGene:100191967	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	ProteinID:AQL04635.1	UniProt:B4FAT9	EMBL:BT034227
EMBL:BT042921	EMBL:BT067015	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	TMHMM:TMhelix	UniParc:UPI00017B616F	EnsemblPlantsGene:Zm00001d046586
EnsemblPlants:Zm00001d046586_P001	EnsemblPlants:Zm00001d046586_T001	SEG:seg	:	:	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr9:+:97425941..97427404

Molecular Weight (calculated)

51732.2 Da

IEP (calculated)

6.584

GRAVY (calculated)

0.669

Length

487 amino acids

Sequence
(BLAST)

001: MNTNYSALPL TSPSIELQPN GAKSSAAANG VLNGHAKISR QDSFLGEVED DGGGAGEHDE LPLIGDGPAG PPEGSDVTAA VFNLATSIIG AGIMALPATM
101: KVLGVAAGLV SILVMGVLSE ITVELLVRFS AHCRALSYGE VVHRAMGRPA SIVAQMCVII NNAGVLVVYL IIIGDVMSGS LKHIGVMDQL VGHGEWDNRK
201: LLILVVLVIF LAPLCALEKI DSLSMSSAAS VALAVVFVVV SSIIALIKIA EGKISMPRMG PDFSSRAAML DLLVVIPIMT NAFICHFNVQ PIYNELKEKT
301: PQNMYKVGRI STVLCVAVYA LTALSGYLLF GEDTESDVLT NFDKDLGIRF SSLLNYIVRI GYVIHLVLVF PVVHFSLRQT VEALIFGELA TPSRKRTFTL
401: TVVLLALIYL GSTMIPNIWM AFKFTGATTG LALGFMFPAL VALRLDKEGS HLGHGERLLA LGLLGLSILV SVIGVVGNVY TLKSKSE

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.