Factsheet for Bra035175.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87318	Canola	plasma membrane	99.59	99.59
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	90.29	89.37
Bra008469.1-P	Field mustard	plasma membrane	88.22	88.59
Bra003570.1-P	Field mustard	cytosol	80.99	85.03
KRH09698	Soybean	plasma membrane	67.36	77.8
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	71.49	71.34
PGSC0003DMT400036836	Potato	plasma membrane	69.01	70.76
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.11	70.65
Solyc03g117350.1.1	Tomato	plasma membrane	68.8	70.55
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	58.26	62.95
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	59.71	60.59
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	61.16	60.29
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	60.33	60.08
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	60.74	59.88
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	59.5	59.5
Zm00001d046586_P001	Maize	plasma membrane	58.68	58.32
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	48.35	49.68
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	60.74	45.58
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	39.46	41.52
Bra020737.1-P	Field mustard	plasma membrane	39.26	41.39
Bra036198.1-P	Field mustard	plasma membrane	38.84	41.23
Bra014071.1-P	Field mustard	plasma membrane	35.12	38.03
Bra007225.1-P	Field mustard	plasma membrane	34.09	38.02
Bra028420.1-P	Field mustard	plasma membrane	33.88	37.27
Bra007226.1-P	Field mustard	plasma membrane	31.61	36.6
Bra017005.1-P	Field mustard	plastid	31.41	34.23

Protein Annotations

EnsemblPlants:Bra035175.1	EnsemblPlants:Bra035175.1-P	EnsemblPlantsGene:Bra035175	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002541E37	UniProt:M4F278	MapMan:24.2.3.4.7	:	:	:

Description

AT1G80510 (E=1e-198) | amino acid transporter family protein

Coordinates

chrA07:-:22454688..22456142

Molecular Weight (calculated)

52329.4 Da

IEP (calculated)

6.101

GRAVY (calculated)

0.656

Length

484 amino acids

Sequence
(BLAST)

001: MDSSYSVISK NSNVELQKQT SKLLPPSDEE SFVNDFDDTR SLVGDQEADD LDFDISNYPL VNGKSSQGGS GIHGAVFNLT TSIIGAGIMA LPATMKVLGL
101: VLGFVLIILM AILSEISVEL LIRFSVLYES RSYGEVVQFA MGRSARVLSE ICIIVNNGGV LVVCLVIMGD VMSGSLHHIG VLDQWLGNGF WDHRKVLILI
201: VMVVFLAPLC ALNKIDSLSV TSAASVALAV VFVVVCFAVA AIKLVEGTID TPRLSPDFSS KEAILDLLVV IPIMSNAYVC HFNVQPIYNE LEGRSPHKMN
301: RVGRITTAIC VVVYASTAIS GYLLFGVATE ADILTNFDKD LGIRFSSAVN YVVRIGYILH LVLVFPVIHF SLRETVNTLL FEGSPPLSES KKRSLGLTLI
401: LLALIYIGST MIPNIWTAFK FTGATSAVSL GFTFPALIAL RLGKQSNTLS FVERSVSWLM LILAVVVSIV GTVGNVYSIR SKSD

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.