Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G507300.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 98.35 | 97.35 |
| TraesCS7B01G433400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 96.91 | 95.93 |
| EER90107 | Sorghum | cytosol, peroxisome, plastid, vacuole | 82.3 | 82.64 |
| Os06t0644700-01 | Rice | cytosol, peroxisome, plasma membrane | 81.07 | 82.6 |
| Zm00001d046586_P001 | Maize | plasma membrane | 81.07 | 80.9 |
| HORVU7Hr1G115450.1 | Barley | cytosol, peroxisome, plastid | 96.09 | 72.4 |
| KRH09698 | Soybean | plasma membrane | 60.49 | 70.17 |
| GSMUA_Achr1P15770_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 62.55 | 67.86 |
| CDX79381 | Canola | plasma membrane | 61.52 | 64.72 |
| PGSC0003DMT400036836 | Potato | plasma membrane | 62.76 | 64.62 |
| Bra003570.1-P | Field mustard | cytosol | 61.11 | 64.43 |
| Solyc03g117350.1.1 | Tomato | plasma membrane | 62.55 | 64.41 |
| VIT_09s0002g08410.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 65.43 | 64.37 |
| CDX67951 | Canola | plasma membrane | 61.93 | 64.18 |
| KRH23609 | Soybean | cytosol, peroxisome, plasma membrane | 63.79 | 63.92 |
| CDY37600 | Canola | cytosol, peroxisome, plasma membrane | 62.14 | 62.66 |
| Bra008469.1-P | Field mustard | plasma membrane | 62.14 | 62.66 |
| CDY38675 | Canola | plasma membrane | 61.73 | 62.24 |
| CDX87318 | Canola | plasma membrane | 60.49 | 60.74 |
| CDY39969 | Canola | plasma membrane | 60.08 | 60.33 |
| Bra035175.1-P | Field mustard | plasma membrane | 60.08 | 60.33 |
| AT1G80510.1 | Thale cress | cytosol, peroxisome, plasma membrane | 60.08 | 59.71 |
| GSMUA_Achr3P00900_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 48.56 | 50.11 |
| TraesCS6A01G288200.1 | Wheat | plasma membrane | 38.68 | 41.96 |
| TraesCS7A01G212200.2 | Wheat | plasma membrane | 37.65 | 39.7 |
| TraesCS6A01G170700.1 | Wheat | plasma membrane | 36.63 | 38.86 |
| TraesCS7A01G391600.1 | Wheat | plasma membrane | 36.42 | 38.65 |
| TraesCS3A01G346700.1 | Wheat | plasma membrane | 33.95 | 35.95 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G517100.1 | EnsemblPlantsGene:TraesCS7A01G517100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF346 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.7 |
Description
No Description!
Coordinates
chr7A:+:701528382..701529842
Molecular Weight (calculated)
51678.1 Da
IEP (calculated)
5.923
GRAVY (calculated)
0.663
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNSNYSALP LTSTAIELQS AQPPPPPKSG ASAKLTKQDS FLGEVEDDDA ATPGEHDELP LIGDDGPAGP PEGSGVSGAV FNLATSIIGA GIMALPATMK
101: VLGVAVGLVS ILVMGVLSEV TIELLVRFAV RCRALSYGEL VHRALGRPAS VVAQLCIVVN NAGILVVYLI IIGDVMSGSL KHMGVMDQLV GQGEWDNRRL
201: LILFVLVVFL APLCALEKID SLSLSSAASV GLAVVFVAVS CMIAAVKLVE GKLAAPRMGP DFSSKAAILD LLVVIPIMTN AYICHFNVQP IYNELKEKTP
301: QNMYNISRIS TVLCVVVYSL TAISGYLLFG DDTESDVLTN FDKDLGIKFS TVLNYIVRIG YIVHLVLVFP VVHFSLRQTV DSLVFGELAP HSRKRMLSLT
401: VVLLALIYLG STMIPNIWMA FKFTGATTGL ALGFMFPALV ALRLDKEGEC LGRGERLLSV GMLGLAIVVS VVGVVGNVYS LRSKSE
101: VLGVAVGLVS ILVMGVLSEV TIELLVRFAV RCRALSYGEL VHRALGRPAS VVAQLCIVVN NAGILVVYLI IIGDVMSGSL KHMGVMDQLV GQGEWDNRRL
201: LILFVLVVFL APLCALEKID SLSLSSAASV GLAVVFVAVS CMIAAVKLVE GKLAAPRMGP DFSSKAAILD LLVVIPIMTN AYICHFNVQP IYNELKEKTP
301: QNMYNISRIS TVLCVVVYSL TAISGYLLFG DDTESDVLTN FDKDLGIKFS TVLNYIVRIG YIVHLVLVFP VVHFSLRQTV DSLVFGELAP HSRKRMLSLT
401: VVLLALIYLG STMIPNIWMA FKFTGATTGL ALGFMFPALV ALRLDKEGEC LGRGERLLSV GMLGLAIVVS VVGVVGNVYS LRSKSE
001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
Arabidopsis Description
AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.