Factsheet for VIT_09s0002g08410.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 2
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09698	Soybean	plasma membrane	70.04	82.58
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	75.71	77.11
Solyc03g117350.1.1	Tomato	plasma membrane	71.86	75.21
PGSC0003DMT400036836	Potato	plasma membrane	71.46	74.79
CDY38675	Canola	plasma membrane	72.67	74.48
Bra008469.1-P	Field mustard	plasma membrane	72.47	74.27
CDY37600	Canola	cytosol, peroxisome, plasma membrane	72.47	74.27
CDX79381	Canola	plasma membrane	69.43	74.24
CDX67951	Canola	plasma membrane	70.24	73.99
Bra003570.1-P	Field mustard	cytosol	68.83	73.75
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	72.67	73.42
CDY39969	Canola	plasma membrane	71.46	72.93
CDX87318	Canola	plasma membrane	71.05	72.52
Bra035175.1-P	Field mustard	plasma membrane	70.65	72.11
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	62.35	68.75
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	63.97	66.25
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	65.38	65.78
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	64.17	65.5
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.37	65.43
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.98	65.38
Zm00001d046586_P001	Maize	plasma membrane	63.77	64.68
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	50.4	52.87
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	64.98	49.77
VIT_18s0001g08570.t01	Wine grape	mitochondrion, plasma membrane	40.08	44.1
VIT_14s0083g00740.t01	Wine grape	plasma membrane	38.87	41.56
VIT_13s0067g02220.t01	Wine grape	golgi, plasma membrane, plastid, vacuole	36.64	40.86

Protein Annotations

EntrezGene:100261172	wikigene:100261172	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:AM481844	ProteinID:CAN77569
ProteinID:CAN77569.1	ProteinID:CCB59684	ProteinID:CCB59684.1	UniProt:F6HXM7	EMBL:FN596494	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100261172	wikigene:LOC100261172	PFAM:PF01490	PRINTS:PR00173
PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	TMHMM:TMhelix	UniParc:UPI00015CC215	ArrayExpress:VIT_09s0002g08410	EnsemblPlantsGene:VIT_09s0002g08410
EnsemblPlants:VIT_09s0002g08410.t01	unigene:Vvi.22046	RefSeq:XP_002268792	RefSeq:XP_002268792.1	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:9402458..9404718

Molecular Weight (calculated)

53502.0 Da

IEP (calculated)

6.173

GRAVY (calculated)

0.660

Length

494 amino acids

Sequence
(BLAST)

001: MESNYSALRT NSFVELQIHN DKNEDGVSLV SQNPRSSEKP HVKLLPLDES NNVNDVDDDF DFDIDNYPLM DGGVRSNKGS GISGAVFNLT TSIIGAGIMA
101: LPATMKILGV VLGFVLIVLM GILSEISVEL LLRFSVLNKA SSYGEVVQCA LGRSARILSE ICIIVNNAGV LVVYLIIIGD VLSGSAHHVG VFDQWLGNGA
201: WDQRKLVIFV ILVIFLAPLC FLEKIDSLSL TSAASVALAV VFVFVACVVA FIKLVEGQIE SPRMAPDFGS KAAILDLLVV IPIMTNAYVC HFNVQPIYNE
301: LEGPSPQKMN RVGRITTVLC IVVYALTAIS GYLLFGKDTE SDVLTNFDKN LGIRFSSALN YIVRVGYVLH LVLVFPVVHF SLRQTVDALM FEASAPLSES
401: RKRSLALTVV LLMLIYFGST MIPNIWTAFK FTGATTAVSL GFIFPALIAL KLGGKGVGLS LGEKFFSWLM LILATIVSVV GVIGNIYSLK SKSE

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.