Factsheet for TraesCS7D01G507300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	97.35	98.35
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	96.54	96.54
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	82.89	84.09
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	81.06	83.44
Zm00001d046586_P001	Maize	plasma membrane	81.67	82.34
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	97.15	73.95
KRH09698	Soybean	plasma membrane	59.67	69.93
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	62.32	68.3
CDX79381	Canola	plasma membrane	61.51	65.37
Solyc03g117350.1.1	Tomato	plasma membrane	62.53	65.04
PGSC0003DMT400036836	Potato	plasma membrane	62.53	65.04
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	65.38	64.98
Bra003570.1-P	Field mustard	cytosol	60.69	64.64
CDX67951	Canola	plasma membrane	61.71	64.61
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	62.93	63.71
Bra008469.1-P	Field mustard	plasma membrane	62.12	63.28
CDY37600	Canola	cytosol, peroxisome, plasma membrane	61.91	63.07
CDY38675	Canola	plasma membrane	61.51	62.66
CDX87318	Canola	plasma membrane	60.29	61.16
CDY39969	Canola	plasma membrane	59.88	60.74
Bra035175.1-P	Field mustard	plasma membrane	59.88	60.74
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	59.88	60.12
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	48.27	50.32
TraesCS6D01G270800.1	Wheat	plasma membrane	38.7	42.7
TraesCS7D01G213900.1	Wheat	plasma membrane	37.07	39.48
TraesCS6D01G160400.1	Wheat	peroxisome	35.85	38.43
TraesCS7D01G387200.1	Wheat	plasma membrane	35.85	38.43
TraesCS3D01G340400.1	Wheat	plasma membrane	34.42	36.82

Protein Annotations

EnsemblPlants:TraesCS7D01G507300.1	EnsemblPlantsGene:TraesCS7D01G507300	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7

Description

No Description!

Coordinates

chr7D:+:611590926..611592401

Molecular Weight (calculated)

52144.6 Da

IEP (calculated)

6.347

GRAVY (calculated)

0.653

Length

491 amino acids

Sequence
(BLAST)

001: MVNSNYSALP LTATAIELQS AHPPPPPKSG ASANGHAKLT KQDSFLGEVE DDDADATPGE HDSLPLIGDD GPAGPPEGSG VSGAVFNLAT SIIGAGIMAL
101: PATMKVLGVA VGLVSILVMG VLSEVTIELL VRFAVRCRAL SYGELVHRAL GRPASVVAQL CIVVNNAGIL VVYLIIIGDV MSGSLKHMGV MDQLVGHGEW
201: DNRRLLILFV LVVFLAPLCA LEKIDSLSLS SAASVGLAVV FVAVSCMIAA VKLVEGKLAA PRMGPDFSSR AAILDLLVVI PIMTNAYICH FNVQPIYNEL
301: KEKTPQNMYN VSRISTVLCV VVYALTAISG YLLFGDDTES DVLTNFDKDL GIKFSTVLNY IVRIGYIVHL VLVFPVVHFS LRQTVDSLVF GELAPHSRKR
401: MLSLTVVLLA LIYLGSTMIP NIWMAFKFTG ATTGLALGFM FPALVALRLD KEGECLGRGE RLLSLGMLGL AIVVSVVGVV GNVYSLRSKS E

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.