Factsheet for TraesCS7D01G213900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G212200.2	Wheat	plasma membrane	99.57	99.57
TraesCS7B01G119000.2	Wheat	plasma membrane	98.92	98.92
HORVU7Hr1G065280.2	Barley	plasma membrane	98.7	98.48
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	36.44	98.25
Os06t0275800-01	Rice	plasma membrane	86.77	89.29
EER88229	Sorghum	plasma membrane	86.55	86.93
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	66.16	76.06
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	74.4	74.08
TraesCS6D01G270800.1	Wheat	plasma membrane	69.2	71.69
VIT_14s0083g00740.t01	Wine grape	plasma membrane	68.76	68.61
Zm00001d045740_P001	Maize	plasma membrane	85.47	68.05
TraesCS7D01G387200.1	Wheat	plasma membrane	67.46	67.9
Solyc02g089400.2.1	Tomato	plasma membrane	67.68	67.83
PGSC0003DMT400068294	Potato	plasma membrane	66.38	66.09
CDX86347	Canola	plasma membrane	65.51	65.65
CDY35776	Canola	plasma membrane	65.08	65.5
TraesCS6D01G160400.1	Wheat	peroxisome	65.08	65.5
Solyc02g065680.2.1	Tomato	plasma membrane	65.73	65.44
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	65.29	65.43
CDY45907	Canola	plasma membrane	65.08	65.22
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	65.29	65.15
Bra020737.1-P	Field mustard	plasma membrane	64.64	64.92
AT3G30390.2	Thale cress	plasma membrane	64.64	64.78
Bra036198.1-P	Field mustard	plasma membrane	63.34	64.04
CDY67720	Canola	plasma membrane	63.56	63.97
CDY00078	Canola	plasma membrane	63.34	63.76
PGSC0003DMT400003740	Potato	plasma membrane	66.59	63.69
CDX74504	Canola	plasma membrane	44.9	63.69
KRG93742	Soybean	plasma membrane	63.56	63.28
CDY37894	Canola	plasma membrane	62.04	63.13
KRH01440	Soybean	plasma membrane	63.56	63.01
AT5G38820.2	Thale cress	plasma membrane	62.91	62.91
KRH45158	Soybean	plasma membrane	63.12	62.45
Bra014071.1-P	Field mustard	plasma membrane	58.57	60.4
KRH18319	Soybean	plasma membrane	60.3	59.78
CDY17030	Canola	plasma membrane	58.35	59.65
CDY47589	Canola	plasma membrane	57.92	59.07
KRG93745	Soybean	plasma membrane	59.44	59.05
KRH54971	Soybean	plasma membrane	59.65	58.51
CDX67416	Canola	plasma membrane	55.1	57.73
CDY49071	Canola	plasma membrane	54.88	57.63
Bra028420.1-P	Field mustard	plasma membrane	54.23	56.82
TraesCS3D01G340400.1	Wheat	plasma membrane	46.42	46.62
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	39.48	37.07

Protein Annotations

EnsemblPlants:TraesCS7D01G213900.1	EnsemblPlantsGene:TraesCS7D01G213900	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF270	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr7D:+:173707406..173710908

Molecular Weight (calculated)

49766.0 Da

IEP (calculated)

6.951

GRAVY (calculated)

0.710

Length

461 amino acids

Sequence
(BLAST)

001: MTTGAVTESF PESSEPLLPT KRRWEGEDGG GDEAAFHEFN GASFAGAVFN LSTTIVGAGI MALPATMKVL GLVPGLVMIV LAAFLTDASV ELLMRFSRVV
101: GAPSYGAVMG DAFGWWGRRL LQVCVVVNNV GVMIVYVIII GDVLSGTSSG GEHHYGVLEG WFGTHWWNGR FFVLLVTTLG VFTPLACFKR VDSLSYTSAI
201: SVALAVVFVV ITAGIAIVKL IRGQIPMPKL FPAVPDLASV WELFTAVPVL VTAYVCHYNV HPIHNELKES SQIKPIVHTS LALCSTVYIT TSFFGYLLFG
301: ESTLADVLAN FDSNLGIPYS SVLSDAVRVS YAIHLMLVFP MIFHALRLNL DGLLFSSARP LSSDNRRFGV MTAVLLLVIF ISANFIPSIW DAFQFTGATA
401: AVCIAFIFPA AITLRDPHSI AKKWDKILAI FMIVLAVTSN VVAVYSDAYS IFHKKSASSN A

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.