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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g065680.2.1 Tomato plasma membrane 95.25 95.25
PGSC0003DMT400003740 Potato plasma membrane 86.18 82.78
VIT_14s0083g00740.t01 Wine grape plasma membrane 79.48 79.65
KRH01440 Soybean plasma membrane 74.3 73.98
KRH45158 Soybean plasma membrane 73.43 72.96
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 71.27 71.74
CDX86347 Canola plasma membrane 71.27 71.74
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 71.06 71.21
CDY35776 Canola plasma membrane 70.41 71.18
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 61.34 70.82
CDY45907 Canola plasma membrane 70.19 70.65
CDY00078 Canola plasma membrane 69.76 70.52
AT3G30390.2 Thale cress plasma membrane 69.98 70.43
Bra020737.1-P Field mustard plasma membrane 69.76 70.37
CDY67720 Canola plasma membrane 69.55 70.31
Bra036198.1-P Field mustard plasma membrane 69.11 70.18
CDX74504 Canola plasma membrane 49.03 69.85
CDY37894 Canola plasma membrane 68.03 69.54
KRG93742 Soybean plasma membrane 69.33 69.33
AT5G38820.2 Thale cress plasma membrane 68.9 69.2
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 68.25 68.25
KRH18319 Soybean plasma membrane 67.6 67.31
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 24.84 67.25
KRG93745 Soybean plasma membrane 66.74 66.59
TraesCS7A01G212200.2 Wheat plasma membrane 66.31 66.59
HORVU6Hr1G072350.1 Barley plasma membrane 64.36 66.52
TraesCS7D01G213900.1 Wheat plasma membrane 66.09 66.38
HORVU7Hr1G065280.2 Barley plasma membrane 66.09 66.23
TraesCS7B01G119000.2 Wheat plasma membrane 65.87 66.16
PGSC0003DMT400012670 Potato plasma membrane 56.8 66.08
TraesCS6B01G317700.1 Wheat plasma membrane 63.5 66.07
Os06t0275800-01 Rice plasma membrane 63.71 65.85
TraesCS6D01G270800.1 Wheat plasma membrane 63.28 65.84
TraesCS7D01G387200.1 Wheat plasma membrane 65.01 65.72
TraesCS7B01G293500.3 Wheat plasma membrane 65.01 65.72
TraesCS7A01G391600.1 Wheat plasma membrane 65.01 65.72
Zm00001d015658_P001 Maize plasma membrane 63.93 65.63
EER88229 Sorghum plasma membrane 65.01 65.58
Os06t0633800-01 Rice peroxisome 64.79 65.5
PGSC0003DMT400012672 Potato plasma membrane 63.71 65.41
TraesCS6A01G288200.1 Wheat plasma membrane 63.28 65.4
Bra014071.1-P Field mustard plasma membrane 62.85 65.1
KXG29680 Sorghum plasma membrane 63.71 64.84
EER88687 Sorghum cytosol, peroxisome, plasma membrane 64.15 64.71
Os02t0727100-01 Rice plasma membrane 62.42 64.51
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 62.85 63.4
HORVU6Hr1G034900.1 Barley peroxisome 62.63 63.18
TraesCS6B01G198900.1 Wheat peroxisome 62.42 63.1
CDY17030 Canola plasma membrane 61.34 62.97
TraesCS6A01G170700.1 Wheat plasma membrane 62.2 62.88
TraesCS6D01G160400.1 Wheat peroxisome 62.2 62.88
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 64.15 62.53
CDY47589 Canola plasma membrane 60.69 62.17
Zm00001d051703_P001 Maize plasma membrane 64.36 61.07
CDY49071 Canola plasma membrane 57.45 60.59
CDX67416 Canola plasma membrane 57.45 60.45
Bra028420.1-P Field mustard plasma membrane 56.8 59.77
HORVU7Hr1G092550.1 Barley cytosol 64.15 57.34
KXG30838 Sorghum plasma membrane 63.93 53.43
Zm00001d045740_P001 Maize plasma membrane 65.01 51.99
PGSC0003DMT400074955 Potato plasma membrane 43.41 45.68
PGSC0003DMT400030399 Potato plasma membrane 43.2 45.66
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 27.21 43.3
PGSC0003DMT400074952 Potato plasma membrane 40.17 42.27
PGSC0003DMT400036836 Potato plasma membrane 41.9 41.1
Protein Annotations
EnsemblPlants:PGSC0003DMT400068294EnsemblPlantsGene:PGSC0003DMG400026549EntrezGene:102597524GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF292PFAM:PF01490PGSC:PGSC0003DMG400026549RefSeq:XP_006365650.1
RefSeq:XP_015160016.1RefSeq:XP_015160017.1SEG:segTMHMM:TMhelixUniParc:UPI0002961E0DUniProt:M1CIS8
MapMan:24.2.3.4.7:::::
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400026549]
Coordinates
chr2:+:24907881..24913763
Molecular Weight (calculated)
50381.4 Da
IEP (calculated)
8.543
GRAVY (calculated)
0.676
Length
463 amino acids
Sequence
(BLAST)
001: MTIGSLKQAK EKKSRKNKQA VVDEQSPLLP TKHKEDAGFD EFDGASFSGA VFNLSTTIVG AGIMALPATM KSLGLIPGIA MIVFMAFLTE TSIELLIRFS
101: RTSKSASYGG LMGDTFGKYG KMLLQICILV NNIGVLVVYM IIIGDVLSGT KSSGVHHAGV LEGWFGTHWW NSRFFILLVT TLGIFAPLAS LKRIDSLRFT
201: SALSVALAVV FLVVTVGITI FKLMNGTILM PRLFPDVYDI TSFLKLFTVV PVLVTAYICH YNVHSIENEL EDSTQIRAVV KSSLALCSSV YVLTSLFGFL
301: LFGDATLDDV LANFDTNLGI PLGSLLNDVV RVSYAAHLML VFPIVFYPLR LNLDGLLFPS ARPLTCDNLR FALISSGLIA IIFLGANFIP SIWDAFQFTG
401: ATAAVCIGFI FPASVTLRDR YGIATKKDKI LCIFMIVIAV FSNVVAIYSD AYSLIKKNSS PSE
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.