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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67416 Canola plasma membrane 98.41 98.41
Bra014071.1-P Field mustard plasma membrane 79.77 78.52
AT5G38820.2 Thale cress plasma membrane 70.0 66.81
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 65.0 62.17
Bra020737.1-P Field mustard plasma membrane 64.55 61.87
Bra036198.1-P Field mustard plasma membrane 62.73 60.53
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 22.73 58.48
VIT_14s0083g00740.t01 Wine grape plasma membrane 61.14 58.23
Solyc02g089400.2.1 Tomato plasma membrane 60.45 57.83
PGSC0003DMT400068294 Potato plasma membrane 59.77 56.8
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 51.14 56.11
Solyc02g065680.2.1 Tomato plasma membrane 58.64 55.72
TraesCS7B01G119000.2 Wheat plasma membrane 57.5 54.88
TraesCS7A01G212200.2 Wheat plasma membrane 57.05 54.45
PGSC0003DMT400003740 Potato plasma membrane 59.55 54.36
TraesCS7D01G213900.1 Wheat plasma membrane 56.82 54.23
KRG93742 Soybean plasma membrane 57.05 54.21
HORVU7Hr1G065280.2 Barley plasma membrane 56.82 54.11
KRH45158 Soybean plasma membrane 56.82 53.65
KRH01440 Soybean plasma membrane 56.59 53.55
EER88229 Sorghum plasma membrane 55.68 53.38
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 56.14 53.35
Zm00001d015658_P001 Maize plasma membrane 54.32 52.99
Os06t0275800-01 Rice plasma membrane 53.86 52.9
TraesCS7A01G391600.1 Wheat plasma membrane 54.77 52.62
TraesCS7D01G387200.1 Wheat plasma membrane 54.55 52.4
TraesCS7B01G293500.3 Wheat plasma membrane 54.55 52.4
Os06t0633800-01 Rice peroxisome 54.32 52.18
TraesCS6D01G270800.1 Wheat plasma membrane 52.73 52.13
KXG29680 Sorghum plasma membrane 53.86 52.09
TraesCS6B01G317700.1 Wheat plasma membrane 52.5 51.91
HORVU6Hr1G072350.1 Barley plasma membrane 52.73 51.79
TraesCS6A01G288200.1 Wheat plasma membrane 52.73 51.79
EER88687 Sorghum cytosol, peroxisome, plasma membrane 53.64 51.42
Os02t0727100-01 Rice plasma membrane 52.27 51.34
TraesCS6A01G170700.1 Wheat plasma membrane 52.73 50.66
KRG93745 Soybean plasma membrane 53.41 50.65
KRH18319 Soybean plasma membrane 53.41 50.54
TraesCS6D01G160400.1 Wheat peroxisome 52.27 50.22
TraesCS6B01G198900.1 Wheat peroxisome 52.27 50.22
HORVU6Hr1G034900.1 Barley peroxisome 52.27 50.11
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 52.27 50.11
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 53.86 49.89
HORVU7Hr1G092550.1 Barley cytosol 53.86 45.75
Zm00001d051703_P001 Maize plasma membrane 50.68 45.7
Zm00001d045740_P001 Maize plasma membrane 56.82 43.18
KXG30838 Sorghum plasma membrane 51.36 40.79
Bra007225.1-P Field mustard plasma membrane 37.5 38.02
Bra017005.1-P Field mustard plastid 36.82 36.49
Bra003570.1-P Field mustard cytosol 38.18 36.44
Bra007226.1-P Field mustard plasma membrane 33.18 34.93
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 22.73 34.36
Bra035175.1-P Field mustard plasma membrane 37.27 33.88
Bra008469.1-P Field mustard plasma membrane 36.14 32.99
Protein Annotations
EnsemblPlants:Bra028420.1EnsemblPlants:Bra028420.1-PEnsemblPlantsGene:Bra028420GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF292PFAM:PF01490TMHMM:TMhelixUniParc:UPI0002543243
UniProt:M4EI05MapMan:24.2.3.4.7::::
Description
AT5G38820 (E=5e-120) | amino acid transporter family protein
Coordinates
chrA02:+:211950..213513
Molecular Weight (calculated)
48125.7 Da
IEP (calculated)
8.304
GRAVY (calculated)
0.669
Length
440 amino acids
Sequence
(BLAST)
001: MSSTTDEEVQ NDLKDQLVQR SESDDHAEFK GASFTGAVLN LATTIIGAGI MALPATMKIL GLLPGIVMIV LMAFLTDKTI EILLRFSGIG NASSYGALMQ
101: DSFGRPGRIV LQVAVLVSNI GVLIVYMIII GDAFEDMLKE RLGKSWWDQR TIVLLFTTCV FAPFTAFKQI DALRFASATS LALAVLFLVI TGGIVVTKFL
201: SGGLMKPKLL PSFTDLSSVL KLFTVVPVLV NAFICHSNVH NIQNELQDST QIKPVVRSSL IMSSSVYIVT SLFGYLLFGE YTHEDVLKNF DTHLKIPYGP
301: VLSDVVRVSY AAHLMLVFPI IFYPLRVNVD GLFFPTAPSL TTSNLRFRSI TAGLIAVIFV GANFIPSIWD AFQLIGATAS VCIGFIFPAA VILKDRHNRA
401: TKMEKTIAIF VIVLAVFSNA IAMYSDVCAL LNKYKSTFPM
Best Arabidopsis Sequence Match ( AT5G38820.2 )
(BLAST)
001: MISGSMENLD EIRTDIVEST APLLQESSSE SNGGGEFNGA SFSGAVFNLA TTIIGAGIMA LPATMKILGL IPGITIIVLM AFLTDASIEF LLRFSNIGNQ
101: RSYGGVMDDS FGKCGRIMLQ VSILVSNIGV LIVYMIIIGD VLAGKNEYGI HHAGMLEGWF GISWWNRRTF VLLVTTLTVF APLTCFKRID SLRFTSAISV
201: ALAVVFLVIT AGITIIKLFT DGLMMPRLLP NVTDLSSFWK LFTVVPVLVN AYICHYNVHS IQNELEDPSR IKPVVRSALA MCSSVYVMTS LFGYLLFGDG
301: TLDDVLANFD TDLGIPFGSV LNDAVRFSYA AHLMLVFPVV FYPLRINIDG LIFPTAPPLT SSESDLRFGS ITAGLIAVIF LGANFIPSIW DAFQFTGATA
401: AVCIGFIFPA AVILKDRHNQ ATKRDKTIAI CMIVLAVFSN AIAIYSDAYA LFKKHTYVYP I
Arabidopsis Description

SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.