Factsheet for Bra003570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67951	Canola	plasma membrane	98.48	96.8
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	88.29	83.23
Bra008469.1-P	Field mustard	plasma membrane	86.55	82.78
Bra035175.1-P	Field mustard	plasma membrane	85.03	80.99
KRH09698	Soybean	plasma membrane	70.28	77.33
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	73.32	69.69
PGSC0003DMT400036836	Potato	plasma membrane	70.72	69.07
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.75	68.83
Solyc03g117350.1.1	Tomato	plasma membrane	69.85	68.22
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	60.52	62.28
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	63.56	61.43
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.43	61.11
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.86	60.9
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.64	60.69
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	62.47	59.5
Zm00001d046586_P001	Maize	plasma membrane	61.17	57.91
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	50.98	49.89
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	64.43	46.05
Bra020737.1-P	Field mustard	plasma membrane	41.43	41.61
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	41.43	41.52
Bra036198.1-P	Field mustard	plasma membrane	40.56	41.01
Bra014071.1-P	Field mustard	plasma membrane	37.53	38.7
Bra007225.1-P	Field mustard	plasma membrane	36.01	38.25
Bra028420.1-P	Field mustard	plasma membrane	36.44	38.18
Bra007226.1-P	Field mustard	plasma membrane	32.54	35.89
Bra017005.1-P	Field mustard	plastid	34.49	35.81

Protein Annotations

EnsemblPlants:Bra003570.1	EnsemblPlants:Bra003570.1-P	EnsemblPlantsGene:Bra003570	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	PFAM:PF01490	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002541301	UniProt:M4CH87	MapMan:24.2.3.4.7	:	:	:

Description

AT1G80510 (E=4e-158) | amino acid transporter family protein

Coordinates

chrA07:+:13846413..13847798

Molecular Weight (calculated)

49453.0 Da

IEP (calculated)

7.459

GRAVY (calculated)

0.692

Length

461 amino acids

Sequence
(BLAST)

001: MDSSYSVISK NSYVELQKQT KLLPPDEESF VNNNNNGVVV AGSNQGSGIS GAVFNLTTSI IGAGIMALPA TMKVLGLFLG LLLIVLIAIL SEISVELLVR
101: FSSLYKSRSY GEVVQFALGK PARVLSEVCI VVNNGGFLVV YLIIMGDVMS GSLHHVGVLD QWLGNGFWDH RKVLILVVVV VFLAPLCALN KIDSLSVTSA
201: ASVALAVVFV VVCFVVAAVK VVEGSVDAPR MSPDFGSKEA VLDLLVVIPI MTNAYVCHFN VQPIYNELEG RTPEKMNRVG RVTTGVCVVV YASTAVSGYL
301: LFGKDTESDV LTNFDQDLGI RFSSAVNYIV RVGYILHLVL VFPVIHFSLR ETVDTLLFEG SPPLCESKKR SLGITVVLLA LIYIGSTMIP NIWTAFKFTG
401: ATSAVSLGST FPALIALRLG KQSNSLSGVE RSVSWLMLVL AVVVSVVGTL GNIYSLRSKS D

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.