Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P15770_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 61.36 | 64.51 |
| KRH09698 | Soybean | plasma membrane | 51.8 | 58.23 |
| Os06t0644700-01 | Rice | cytosol, peroxisome, plasma membrane | 52.65 | 51.99 |
| Bra003570.1-P | Field mustard | cytosol | 49.89 | 50.98 |
| CDX79381 | Canola | plasma membrane | 49.68 | 50.65 |
| Solyc03g117350.1.1 | Tomato | plasma membrane | 50.74 | 50.64 |
| KRH23609 | Soybean | cytosol, peroxisome, plasma membrane | 52.02 | 50.52 |
| PGSC0003DMT400036836 | Potato | plasma membrane | 50.53 | 50.42 |
| VIT_09s0002g08410.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 52.87 | 50.4 |
| CDX67951 | Canola | plasma membrane | 50.11 | 50.32 |
| EER90107 | Sorghum | cytosol, peroxisome, plastid, vacuole | 50.96 | 49.59 |
| CDY38675 | Canola | plasma membrane | 50.74 | 49.59 |
| Bra008469.1-P | Field mustard | plasma membrane | 50.53 | 49.38 |
| CDY37600 | Canola | cytosol, peroxisome, plasma membrane | 50.32 | 49.17 |
| Zm00001d046586_P001 | Maize | plasma membrane | 50.74 | 49.08 |
| CDX87318 | Canola | plasma membrane | 50.11 | 48.76 |
| TraesCS7A01G517100.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 50.11 | 48.56 |
| CDY39969 | Canola | plasma membrane | 49.89 | 48.55 |
| AT1G80510.1 | Thale cress | cytosol, peroxisome, plasma membrane | 50.32 | 48.47 |
| Bra035175.1-P | Field mustard | plasma membrane | 49.68 | 48.35 |
| TraesCS7B01G433400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 50.32 | 48.27 |
| TraesCS7D01G507300.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 50.32 | 48.27 |
| HORVU7Hr1G115450.1 | Barley | cytosol, peroxisome, plastid | 50.32 | 36.74 |
| GSMUA_Achr7P20080_001 | Banana | extracellular, plasma membrane, vacuole | 30.57 | 35.91 |
| GSMUA_Achr8P24480_001 | Banana | cytosol, golgi, plasma membrane | 31.21 | 31.75 |
| GSMUA_Achr7P22240_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 28.45 | 29.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P00900_001 | EnsemblPlants:GSMUA_Achr3T00900_001 | EnsemblPlantsGene:GSMUA_Achr3G00900_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF346 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294C98E | UniProt:M0SAQ8 | MapMan:24.2.3.4.7 | : | : | : |
Description
transmembrane amino acid transporter protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00900_001]
Coordinates
chr3:+:682837..688880
Molecular Weight (calculated)
50836.0 Da
IEP (calculated)
8.634
GRAVY (calculated)
0.694
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPATLKVL GLLVGFVSIV LMGILSEISI ELLVRFSVLC KSSSYGDVVQ TALGRPFKIV SEICVIINNA GVLVVYLIII GDVMSGSSKH VGVFDQLLGS
101: GGEWDHRKLV ILVVLVIFLA PLCSLEKIDS LSLTSAASVA LAVVFVIVSS IIALVKLVEG RIGTPRLGPD FGSKAAFLDL LVVVPIMTNA YVCHFNVQPI
201: YNELEGRTPK KMYLVSRITT VLCVAIYAST AISGYLLFGD DTESDVLTNF DKDLGIRFSL ILNYVTVDSL FTGATTGLSL GFIFPALIAL RLDKKEKVLN
301: LRERYMSWLM LVLAVVASIL GVVGNIFTLK NRSDLRRGFP GRFWDGSFFP AIASNPNHSL SPPWTETGES PCNFLLFPAR SPSSTCPLDR RHLSSLAWVI
401: QTTGAAITDL VIVVVDPAAP PSGAANVSIK IGKFPTAASR RSLGRVSVPV WLIILSDQLL IIALVSYYLT N
101: GGEWDHRKLV ILVVLVIFLA PLCSLEKIDS LSLTSAASVA LAVVFVIVSS IIALVKLVEG RIGTPRLGPD FGSKAAFLDL LVVVPIMTNA YVCHFNVQPI
201: YNELEGRTPK KMYLVSRITT VLCVAIYAST AISGYLLFGD DTESDVLTNF DKDLGIRFSL ILNYVTVDSL FTGATTGLSL GFIFPALIAL RLDKKEKVLN
301: LRERYMSWLM LVLAVVASIL GVVGNIFTLK NRSDLRRGFP GRFWDGSFFP AIASNPNHSL SPPWTETGES PCNFLLFPAR SPSSTCPLDR RHLSSLAWVI
401: QTTGAAITDL VIVVVDPAAP PSGAANVSIK IGKFPTAASR RSLGRVSVPV WLIILSDQLL IIALVSYYLT N
001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
Arabidopsis Description
AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.