CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046586_P001	Maize	plasma membrane	95.25	94.66
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	86.36	87.63
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	84.09	82.89
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	82.64	82.3
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	83.47	82.28
KRH09698	Soybean	plasma membrane	60.12	69.45
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	62.4	67.41
Solyc03g117350.1.1	Tomato	plasma membrane	63.02	64.62
PGSC0003DMT400036836	Potato	plasma membrane	62.81	64.41
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	65.5	64.17
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	84.92	63.72
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	63.22	63.09
CDX79381	Canola	plasma membrane	59.92	62.77
Bra003570.1-P	Field mustard	cytosol	59.5	62.47
CDX67951	Canola	plasma membrane	60.33	62.26
Bra008469.1-P	Field mustard	plasma membrane	61.57	61.83
CDY37600	Canola	cytosol, peroxisome, plasma membrane	61.57	61.83
CDY38675	Canola	plasma membrane	61.16	61.41
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	60.54	59.92
CDX87318	Canola	plasma membrane	59.92	59.92
CDY39969	Canola	plasma membrane	59.5	59.5
Bra035175.1-P	Field mustard	plasma membrane	59.5	59.5
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	49.59	50.96
EER88229	Sorghum	plasma membrane	37.19	39.22
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	35.12	37.04
KXG29680	Sorghum	plasma membrane	34.5	36.7
KXG33635	Sorghum	plasma membrane	33.88	35.27
KXG30838	Sorghum	plasma membrane	36.57	31.95

Protein Annotations

MapMan:24.2.3.4.7	EntrezGene:8058406	InterPro:AA_transpt_TM	UniProt:C5Z6Q3	EnsemblPlants:EER90107	ProteinID:EER90107
ProteinID:EER90107.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005789
GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	PFAM:PF01490
PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	EnsemblPlantsGene:SORBI_3010G206000	unigene:Sbi.21061	TMHMM:TMhelix	UniParc:UPI0001A89A93
RefSeq:XP_002438740.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:54905556..54908230

Molecular Weight (calculated)

51385.0 Da

IEP (calculated)

7.249

GRAVY (calculated)

0.689

Length

484 amino acids

Sequence
(BLAST)

001: MNTNYSALPL TSPSIELQAK SNASANANVN GHAKISKQDS FLGEVEDGGG GAGEHDDLPL IGDGPAGPPE GSGVPAAVFN LATSIIGAGI MALPATMKVL
101: GVAAGLVSIL VMGVLSEITV ELLVRFSAYC RALSYGEVVH RAMGRPASVV AQMCVIINNA GVLVVYLIII GDVMSGSLKH IGVMDQLIGH GEWDNRKLLI
201: LVVLVIFLAP LCALEKIDSL SLSSAASVAL AVVFVVVSCI IALIKIAEGK ISMPRMGPDF SSRAAMLDLL VVIPIMTNAF ICHFNVQPIY NELKEKTPRN
301: MYKVGRISTV LCVVVYALTA LSGYLLFGED TESDVLTNFD KDLGIRFSSL LNYIVRIGYV IHLVLVFPVV HFSLRQTVDA LIFGELATPS RKKTLTLTVV
401: LLALIYLGST MIPNIWMAFK FTGATTGLAL GFMFPALVAL RLDKEGSRLG HGERLLSLGL LGLSIVVSVI GVVGNVYTLK SKSE

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.