Factsheet for Os06t0644700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	87.63	86.36
Zm00001d046586_P001	Maize	plasma membrane	85.53	83.78
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	82.6	81.07
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	83.44	81.06
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	83.23	80.86
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	65.41	69.64
KRH09698	Soybean	plasma membrane	60.8	69.21
PGSC0003DMT400036836	Potato	plasma membrane	63.73	64.41
Solyc03g117350.1.1	Tomato	plasma membrane	63.52	64.19
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.25	63.97
Bra003570.1-P	Field mustard	cytosol	61.43	63.56
CDX79381	Canola	plasma membrane	61.01	62.99
CDX67951	Canola	plasma membrane	61.84	62.9
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	84.28	62.33
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	63.31	62.27
CDY38675	Canola	plasma membrane	62.05	61.41
Bra008469.1-P	Field mustard	plasma membrane	62.05	61.41
CDY37600	Canola	cytosol, peroxisome, plasma membrane	62.05	61.41
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	62.26	60.74
CDX87318	Canola	plasma membrane	61.01	60.12
Bra035175.1-P	Field mustard	plasma membrane	60.59	59.71
CDY39969	Canola	plasma membrane	60.59	59.71
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	51.99	52.65
Os06t0275800-01	Rice	plasma membrane	40.46	43.08
Os02t0727100-01	Rice	plasma membrane	38.57	41.07
Os06t0633800-01	Rice	peroxisome	36.06	37.55
Os01t0825800-01	Rice	plasma membrane	35.64	37.28
Os02t0191300-01	Rice	cytosol, peroxisome, plasma membrane	35.43	36.82

Protein Annotations

MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	ProteinID:BAD37439.1	ProteinID:BAF20103.1	ProteinID:BAS98846.1	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005789	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os06g0644700	EnsemblPlants:Os06t0644700-01	PFAM:PF01490
PANTHER:PTHR22950	PANTHER:PTHR22950:SF346	UniProt:Q67WP1	TMHMM:TMhelix	UniParc:UPI00004262BA	SEG:seg

Description

amino acid transporter-like 1Amino acid transporter, transmembrane domain containing protein. (Os06t0644700-01)

Coordinates

chr6:-:26312771..26315057

Molecular Weight (calculated)

51145.0 Da

IEP (calculated)

7.864

GRAVY (calculated)

0.745

Length

477 amino acids

Sequence
(BLAST)

001: MNTNYSSLPL TSIELQSNQR TSEVANGVGY NGHAKISKQD SFLVDGENDD LPLIGDGPAG PPEGSGVPAA VFNLATSIIG AGIMALPATM KVLGVAVGLV
101: SILVMGILSE VTIELLVRFA VYCRALSYGE VVHKALGRPA SIVAQMCVII NNAGVLIVYL IIIGDVMSGS LKHIGVMDQL IGHGEWDNRR LLILVVLVIF
201: LSPLCALEKI DSLSLSSAAS VALAVVFVVV SCIIALVKVV EGKISMPRMG PDFSSRAAML DLLVVIPIMT NAYICHFNVQ PIYNELKEKT PHNMYKIGRI
301: TTVLCVVVYA LTAVSGYLLF GEDTESDVLT NFDKDLGIRF SSILNFIVRI GYVIHLVLVF PVVHFSLRQT VDSLIFGELA PHSRKKMLTL TVVLLALIYL
401: GSTMIPNIWV AFKFTGATTG LALGFIFPAL IALRLDKEGK SLGKGERLLS IVMLGLAMVV SIIGVIGNVY SLRSKSA

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.