CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003570.1-P	Field mustard	cytosol	96.8	98.48
CDX79381	Canola	plasma membrane	94.67	96.1
AT1G80510.1	Thale cress	cytosol, peroxisome, plasma membrane	88.06	84.46
CDY38675	Canola	plasma membrane	86.57	84.23
CDY37600	Canola	cytosol, peroxisome, plasma membrane	86.35	84.02
CDY39969	Canola	plasma membrane	86.35	83.68
CDX87318	Canola	plasma membrane	85.93	83.26
KRH09698	Soybean	plasma membrane	69.08	77.33
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	72.92	70.52
VIT_09s0002g08410.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.99	70.24
PGSC0003DMT400036836	Potato	plasma membrane	70.15	69.7
Solyc03g117350.1.1	Tomato	plasma membrane	69.51	69.07
GSMUA_Achr1P15770_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	60.34	63.17
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.18	61.93
Os06t0644700-01	Rice	cytosol, peroxisome, plasma membrane	62.9	61.84
TraesCS7B01G433400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.61	61.71
TraesCS7D01G507300.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.61	61.71
EER90107	Sorghum	cytosol, peroxisome, plastid, vacuole	62.26	60.33
Zm00001d046586_P001	Maize	plasma membrane	61.19	58.93
GSMUA_Achr3P00900_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	50.32	50.11
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	64.18	46.67
CDY35776	Canola	plasma membrane	41.36	42.36
CDY45907	Canola	plasma membrane	41.15	41.96
CDX86347	Canola	plasma membrane	41.15	41.96
CDY00078	Canola	plasma membrane	40.94	41.92
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	41.15	41.77
CDY67720	Canola	plasma membrane	40.51	41.48
CDY37894	Canola	plasma membrane	39.23	40.62
CDY47589	Canola	plasma membrane	37.31	38.72
CDX72159	Canola	plasma membrane	35.82	38.71
CDY17030	Canola	plasma membrane	37.1	38.58
CDY49071	Canola	plasma membrane	36.03	38.5
CDY27236	Canola	plasma membrane	35.61	38.48
CDX74504	Canola	plasma membrane	26.65	38.46
CDY27235	Canola	plasma membrane	33.26	38.42
CDX67416	Canola	plasma membrane	35.82	38.18
CDY27234	Canola	plasma membrane	35.61	36.78
CDY52929	Canola	plastid	33.69	35.51
CDY66186	Canola	plasma membrane, plastid	33.9	34.95

Protein Annotations

EnsemblPlants:CDX67951	EnsemblPlantsGene:GSBRNA2T00099162001	GO:A0A078BT56	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF346
PFAM:PF01490	ProteinID:CDX67951	ProteinID:CDX67951.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEC25F
MapMan:24.2.3.4.7	:	:	:	:	:

Description

BnaA07g19910D

Coordinates

chrLK031787:+:3074751..3076160

Molecular Weight (calculated)

50397.0 Da

IEP (calculated)

6.252

GRAVY (calculated)

0.654

Length

469 amino acids

Sequence
(BLAST)

001: MDSSYSAISK NSYVELQKQT KLLPPDEESF VNNNNNNGVV LADDLDPDAG SNQGSGISGA VFNLTTSIIG AGIMALPATM KVLGLFLGLL LIVLIAILSE
101: ISVELLVRFS SLYKSRSYGE VVQFALGKPA RVLSEVCIVV NNGGFLVVYL IIMGDVMSGS LHHVGVLDQW LGNGFWDHRK VLILVVVVVF LAPLCALNKI
201: DSLSVTSAAS VALAVVFVVV CFIVAAVKVV EGSVDAPRMS PDFGSKEAVL DLLVVIPIMT NAYVCHFNVQ PIYNELEGRT PEKMNRVGRV TTGVCVVVYA
301: STAVSGYLLF GKDTESDVLT NFDQDLGIRF SSAVNYIVRV GYILHLVLVF PVIHFSLRET VDTLLFEGSP PLCESKKRSL GLTVILLALI YIGSTMIPNI
401: WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSGVERS VSWLMLILAV VVSVVGTLGN IYSLRSKSD

Best Arabidopsis Sequence Match ( AT1G80510.1 )
(BLAST)

001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD

Arabidopsis Description

AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.