CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014071.1-P	Field mustard	plasma membrane	92.24	93.06
CDY47589	Canola	plasma membrane	91.8	91.59
CDY49071	Canola	plasma membrane	76.72	78.82
CDX67416	Canola	plasma membrane	76.72	78.64
CDY37894	Canola	plasma membrane	78.94	78.59
CDX74504	Canola	plasma membrane	56.1	77.85
AT5G38820.2	Thale cress	plasma membrane	74.28	72.67
CDY35776	Canola	plasma membrane	68.07	67.03
CDY45907	Canola	plasma membrane	67.85	66.52
CDX86347	Canola	plasma membrane	67.63	66.3
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	67.85	66.23
CDY00078	Canola	plasma membrane	65.19	64.19
CDY67720	Canola	plasma membrane	64.97	63.97
Solyc02g089400.2.1	Tomato	plasma membrane	63.86	62.61
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	23.73	62.57
VIT_14s0083g00740.t01	Wine grape	plasma membrane	64.08	62.55
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	54.55	61.35
KRG93742	Soybean	plasma membrane	62.97	61.34
PGSC0003DMT400068294	Potato	plasma membrane	62.97	61.34
KRH45158	Soybean	plasma membrane	63.19	61.16
KRH01440	Soybean	plasma membrane	62.97	61.08
Solyc02g065680.2.1	Tomato	plasma membrane	62.08	60.48
PGSC0003DMT400003740	Potato	plasma membrane	62.75	58.71
TraesCS7B01G119000.2	Wheat	plasma membrane	59.87	58.57
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	60.09	58.53
HORVU7Hr1G065280.2	Barley	plasma membrane	59.87	58.44
TraesCS7D01G213900.1	Wheat	plasma membrane	59.65	58.35
TraesCS7A01G212200.2	Wheat	plasma membrane	59.65	58.35
Os06t0633800-01	Rice	peroxisome	57.87	56.99
Zm00001d015658_P001	Maize	plasma membrane	56.98	56.98
EER88229	Sorghum	plasma membrane	57.65	56.64
TraesCS7D01G387200.1	Wheat	plasma membrane	57.43	56.55
TraesCS7B01G293500.3	Wheat	plasma membrane	57.43	56.55
TraesCS7A01G391600.1	Wheat	plasma membrane	57.43	56.55
KXG29680	Sorghum	plasma membrane	56.98	56.48
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	57.43	56.43
Os06t0275800-01	Rice	plasma membrane	55.65	56.03
TraesCS6A01G170700.1	Wheat	plasma membrane	56.76	55.9
KRG93745	Soybean	plasma membrane	57.43	55.82
HORVU6Hr1G072350.1	Barley	plasma membrane	55.43	55.8
Os02t0727100-01	Rice	plasma membrane	55.43	55.8
TraesCS6D01G270800.1	Wheat	plasma membrane	54.99	55.73
TraesCS6B01G317700.1	Wheat	plasma membrane	54.99	55.73
KRH18319	Soybean	plasma membrane	57.43	55.7
TraesCS6A01G288200.1	Wheat	plasma membrane	55.21	55.58
TraesCS6D01G160400.1	Wheat	peroxisome	56.1	55.24
TraesCS6B01G198900.1	Wheat	peroxisome	56.1	55.24
HORVU6Hr1G034900.1	Barley	peroxisome	56.1	55.12
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	57.65	54.74
Os02t0191300-01	Rice	cytosol, peroxisome, plasma membrane	55.65	54.68
Zm00001d051703_P001	Maize	plasma membrane	55.43	51.23
HORVU7Hr1G092550.1	Barley	cytosol	56.76	49.42
Zm00001d045740_P001	Maize	plasma membrane	58.09	45.25
KXG30838	Sorghum	plasma membrane	54.77	44.58
CDY27236	Canola	plasma membrane	40.13	41.71
CDX72159	Canola	plasma membrane	39.47	41.01
CDY27235	Canola	plasma membrane	36.81	40.89
CDY27234	Canola	plasma membrane	39.25	38.99
CDY52929	Canola	plastid	37.92	38.43
CDX79381	Canola	plasma membrane	38.58	37.66
CDY66186	Canola	plasma membrane, plastid	37.92	37.58
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	24.17	37.46
CDX67951	Canola	plasma membrane	38.58	37.1
CDY39969	Canola	plasma membrane	38.8	36.16
CDX87318	Canola	plasma membrane	38.58	35.95
CDY37600	Canola	cytosol, peroxisome, plasma membrane	38.14	35.68
CDY38675	Canola	plasma membrane	38.14	35.68

Protein Annotations

EnsemblPlants:CDY17030	EnsemblPlantsGene:GSBRNA2T00094999001	GO:A0A078FRF1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF292	PFAM:PF01490	ProteinID:CDY17030	ProteinID:CDY17030.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE05B3	UniProt:A0A078FRF1	MapMan:24.2.3.4.7	:

Description

BnaA08g03940DBnaA08g03940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRF1]

Coordinates

chrLK032069:+:366663..368259

Molecular Weight (calculated)

49255.2 Da

IEP (calculated)

7.017

GRAVY (calculated)

0.724

Length

451 amino acids

Sequence
(BLAST)

001: MATKDEVQND PLLQASESDG HEEFNGASFT GAVLNLATAI IGAGIMALPA TMKVLGLVPG IVMILLMAFL TDKTIDFLLR FSGFGNARRS YGGLMEDSFG
101: KTGRIVLQVA VLVTNVGVLI VYMIILLIFG ICLTLVSLEG DVLEGMLEGW FGESWWDKRT IVLLFTTLCV FAPLTSFKRI DTLRFTSALS LVLAFVFLVI
201: TAGIVITKFY RGGLMKPRLY PNVTDLSSVW KLFTVVPVLV NAYICHSNVH NIQNELEDSI QMKPVVRSAL MMSSSVYVMT SLFGYLLFGE STLDDVLANF
301: DTDLKIPFGP VLSDAVRLSY AAHLMLVFPV IFYPLRVNMD GLLFPTATPS LTTSNLRFAS ITAALIAVIF VGANFIPSIW DAFQLTGATT SVCIGFIFPA
401: AVILKDRHNR ATKMDKTIAI FVIVLAVFSS AVAIYSDAYA LVKKNKPTCS M

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.