Factsheet for Zm00001d046661_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	95.16	98.47
Os06t0633800-01	Rice	peroxisome	90.53	93.89
TraesCS7B01G293500.3	Wheat	plasma membrane	85.89	89.08
TraesCS7A01G391600.1	Wheat	plasma membrane	85.89	89.08
TraesCS7D01G387200.1	Wheat	plasma membrane	85.68	88.86
Zm00001d015658_P001	Maize	plasma membrane	79.37	83.59
HORVU7Hr1G092550.1	Barley	cytosol	86.95	79.73
VIT_14s0083g00740.t01	Wine grape	plasma membrane	63.16	64.94
Solyc02g089400.2.1	Tomato	plasma membrane	62.74	64.78
PGSC0003DMT400068294	Potato	plasma membrane	62.53	64.15
Solyc02g065680.2.1	Tomato	plasma membrane	61.89	63.5
CDX74504	Canola	plasma membrane	43.16	63.08
KRH01440	Soybean	plasma membrane	61.68	63.01
CDY35776	Canola	plasma membrane	60.63	62.88
CDY45907	Canola	plasma membrane	60.63	62.61
Bra020737.1-P	Field mustard	plasma membrane	60.42	62.53
CDY37894	Canola	plasma membrane	59.58	62.47
AT3G30390.2	Thale cress	plasma membrane	60.42	62.39
KRH45158	Soybean	plasma membrane	61.05	62.23
CDX86347	Canola	plasma membrane	60.21	62.17
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	60.21	62.17
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	60.21	61.9
AT5G38820.2	Thale cress	plasma membrane	59.58	61.39
CDY00078	Canola	plasma membrane	58.74	60.92
KRG93742	Soybean	plasma membrane	59.37	60.91
Bra036198.1-P	Field mustard	plasma membrane	58.11	60.53
CDY67720	Canola	plasma membrane	58.32	60.48
PGSC0003DMT400003740	Potato	plasma membrane	61.26	60.37
KRH18319	Soybean	plasma membrane	58.11	59.35
KRG93745	Soybean	plasma membrane	57.68	59.05
Zm00001d051703_P001	Maize	plasma membrane	59.79	58.2
Bra014071.1-P	Field mustard	plasma membrane	54.53	57.94
CDY17030	Canola	plasma membrane	54.74	57.65
CDY47589	Canola	plasma membrane	53.68	56.42
CDY49071	Canola	plasma membrane	50.95	55.13
KRH54971	Soybean	plasma membrane	54.53	55.11
CDX67416	Canola	plasma membrane	50.11	54.09
Bra028420.1-P	Field mustard	plasma membrane	49.89	53.86
Zm00001d045740_P001	Maize	plasma membrane	63.79	52.33
Zm00001d046586_P001	Maize	plasma membrane	36.84	35.93
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	44.21	31.53
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	10.95	28.26

Protein Annotations

EnsemblPlants:Zm00001d046661_P003	EnsemblPlants:Zm00001d046661_T003	EnsemblPlantsGene:Zm00001d046661	EntrezGene:100283030	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF292	PFAM:PF01490	ProteinID:AQL04818.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000844BF32	UniProt:A0A1D6P4C8	MapMan:24.2.3.4.7	:

Description

Amino acid transporter-like protein%3B Amino acid transporter-like protein isoform 1%3B Amino acid transporter-like protein isoform 2

Coordinates

chr9:-:100959343..100966927

Molecular Weight (calculated)

51842.0 Da

IEP (calculated)

7.071

GRAVY (calculated)

0.666

Length

475 amino acids

Sequence
(BLAST)

001: MAALVRRREI PKEDRKMGIG DGSSNGNQQP VHKEIRDETT PLLPVKVEED EGFHEFNGAS FSGAVFNLST TIVGAGIMAL PASIKMLGII PGILLIILVA
101: LLTEASIDML VRCSHQGKIT SYGWLMGEVF GQWGRIALQA SVIINNVGVL IVYMIIIGDV LSGTTSGDVH HRGILEGWFG AHLWNSRAIV LLATALLVFA
201: PLVSFKRLDS LRYTSALSVA LAVVFVVITA GIAIIKLFNG TVAMPKLFPE LDGLNSIWNL FTAVPVLVTA YICHYNVHSI DNELEDRTQI KPIVRTSLFL
301: CSSVYIATSF FAYLLFGEGT LDDVLANFDA NLGIPFSSVF DDIVRVSYAA HVMLVFPIVF FALRLNLDGL LFPTSRHISR DNKRFAIITV SLLAVIYLAA
401: ILIPSIWDAF QFTGATAAVL IGFIFPAMVI LRDSYGIASK RDKILAVTMI VLAVLSNSVA LYSDAMNIFR KKEVA

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.