Factsheet for Zm00001d012485_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	plastid, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33635	Sorghum	plasma membrane	63.81	91.4
TraesCS3B01G378500.1	Wheat	plasma membrane	55.11	80.13
TraesCS3A01G346700.1	Wheat	plasma membrane	55.11	79.96
TraesCS3D01G340400.1	Wheat	plasma membrane	54.95	79.74
Os01t0825800-01	Rice	plasma membrane	53.6	78.29
HORVU3Hr1G045630.2	Barley	plastid	55.86	78.15
GSMUA_Achr7P22240_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	41.59	61.42
VIT_13s0067g02220.t01	Wine grape	golgi, plasma membrane, plastid, vacuole	37.09	55.76
KRH31212	Soybean	plastid	35.29	53.9
Solyc05g052300.2.1	Tomato	cytosol, peroxisome, plasma membrane	35.14	53.42
KRG97662	Soybean	plastid	34.83	53.21
Solyc06g050800.2.1	Tomato	plasma membrane	34.38	52.28
PGSC0003DMT400030399	Potato	plasma membrane	34.38	52.28
PGSC0003DMT400074952	Potato	plasma membrane	34.23	51.82
Solyc06g050790.2.1	Tomato	plasma membrane	33.63	51.49
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	33.48	51.38
PGSC0003DMT400074955	Potato	plasma membrane	33.78	51.14
KRH14885	Soybean	plasma membrane	33.93	51.02
CDY27235	Canola	plasma membrane	31.08	50.99
KRH14877	Soybean	plasma membrane	33.03	50.93
CDY27236	Canola	plasma membrane	33.18	50.92
CDX72159	Canola	plasma membrane	33.18	50.92
KRH73229	Soybean	plasma membrane	33.63	50.79
Bra007225.1-P	Field mustard	plasma membrane	33.03	50.69
Bra017005.1-P	Field mustard	plastid	33.18	49.77
CDY52929	Canola	plastid	33.18	49.66
AT3G56200.1	Thale cress	plasma membrane	32.13	49.2
Bra007226.1-P	Field mustard	plasma membrane	30.63	48.8
CDY27234	Canola	plasma membrane	33.18	48.68
AT2G40420.1	Thale cress	plastid	31.98	48.41
CDY66186	Canola	plasma membrane, plastid	33.03	48.35
Zm00001d051703_P001	Maize	plasma membrane	33.33	45.49
Zm00001d015658_P001	Maize	plasma membrane	30.63	45.23
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	31.53	44.21
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	11.71	42.39
Zm00001d045740_P001	Maize	plasma membrane	32.13	36.96
Zm00001d046586_P001	Maize	plasma membrane	24.32	33.26
KRG90323	Soybean	plasma membrane, vacuole	12.16	27.84

Protein Annotations

EnsemblPlants:Zm00001d012485_P001	EnsemblPlants:Zm00001d012485_T001	EnsemblPlantsGene:Zm00001d012485	EntrezGene:100273033	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF323	PFAM:PF01490	ProteinID:AQK99632.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0008450F7D	UniProt:A0A1D6G914	MapMan:24.2.3.4.7	:

Description

Transmembrane amino acid transporter family protein

Coordinates

chr8:+:175357855..175362943

Molecular Weight (calculated)

68815.4 Da

IEP (calculated)

9.255

GRAVY (calculated)

0.722

Length

666 amino acids

Sequence
(BLAST)

001: MTPPARTSGK RADAGASAGA IDEPLLPESS AGGRHGGGAS VSGAVFNVST SIVGAGIMSI PAAMRVLGVV PAALLIAAVA ALADVSVEFM LRYTGRGWGG
101: GGKDEAATSY AGTMGDAFGR AGAALLNVFV ALTTTGTLVV YLIIIGDVMS GSVGGGDEHA GVLQELFGAR WWTGRQFVLL VTAVFVLLPL VLRRRVGNPS
201: SPNTPLFSAM PSAGRDNATA AEGAAQALLL PEHAGDDDAP CAGGSASVLG AVCNVSTSVV GAGIMSIPAA MRVLGVAPAV ALIAGVAVLA RVAVDFMLRY
301: TRGAPSYAAL MGDAFGSAGA ALLNVFVALN GFGTLTVYLI IIGDVVSGTA SGGVAHPGVL QEWFGRQWWT SREVVLVAAA AILLPLVLRK RVDSLRFTSA
401: ISILLAVVFM LISSGIALYA LFKGTATMPR MFPDFSRLSS PFELFTAVPV IVVAFTFHFN VHPIRAELSK TSDMKVAVRV SLVLCAAIYA AVGFFGFLLF
501: GDATMADVLA NFDRSSGAGV PQALNDAARL SYALHLVLVF PLLLFSLRVN VDELLFPGRR PLAADTRRFV SLTAVLMAVL YVLAIAIPSI WTLFEYSGST
601: FAVTISLIFP GAIVLRDVHG IAKRKDKALA ATMIVLAVVT SSIAIASNIM SSISDEDRGG HVAGRR

Best Arabidopsis Sequence Match ( AT2G40420.1 )
(BLAST)

001: MSPAIKAPLL PNQEPSSSSS ENHGSFAGAV FNISTSIVGA GIMAIPAAFK VLGVIPSLSI IVIIAWLSNV SAGFLMKSSL AGESTTYAGV MKESFGKSGA
101: VAVTVVTMVV TFGSMIIFSI IIGDVISGNE KDGIIHLGLL QEWFGSHWWN TRFFGLLFIF VFLFLPLVLC RRVERLAFSS AISFLLALLF VVISSVLAII
201: ALVQGKTKPP RLFPELNDGG LSFFSLFTAS PVIVTAFTFH FNVHPVAFEL KDPLNVLSAT RISVILCATI YSATGLFCYL LFGDSTMTDV LMNFDQSTSS
301: SVGSLLNDIV RLSYAIHLML VFPLLNFSLR ANLDELLFPM KLSLVEDNKR FFALTFPLLI SCFLGAIAIP DIWYFFQFLG STSTVSIAFI FPAAIVLRNV
401: NGFSTLREKI VASVMLVLAV ATSIIAISTN IYTFTATEET

Arabidopsis Description

AVT6DAmino acid transporter AVT6D [Source:UniProtKB/Swiss-Prot;Acc:Q0WQJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.