Factsheet for HORVU3Hr1G045630.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G346700.1	Wheat	plasma membrane	90.76	94.12
TraesCS3B01G378500.1	Wheat	plasma membrane	90.55	94.1
TraesCS3D01G340400.1	Wheat	plasma membrane	90.34	93.68
HORVU3Hr1G088360.1	Barley	peroxisome, plasma membrane	81.09	82.48
KXG33635	Sorghum	plasma membrane	77.31	79.14
Os01t0825800-01	Rice	plasma membrane	74.16	77.41
GSMUA_Achr7P22240_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	56.72	59.87
VIT_13s0067g02220.t01	Wine grape	golgi, plasma membrane, plastid, vacuole	52.31	56.21
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	78.15	55.86
Solyc05g052300.2.1	Tomato	cytosol, peroxisome, plasma membrane	49.16	53.42
KRH31212	Soybean	plastid	48.11	52.52
PGSC0003DMT400030399	Potato	plasma membrane	48.32	52.51
KRG97662	Soybean	plastid	47.69	52.06
Solyc06g050800.2.1	Tomato	plasma membrane	47.9	52.05
PGSC0003DMT400074952	Potato	plasma membrane	47.9	51.82
KRH73229	Soybean	plasma membrane	47.48	51.25
CDY27235	Canola	plasma membrane	43.7	51.23
KRH14877	Soybean	plasma membrane	46.22	50.93
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.43	50.92
KRH14885	Soybean	plasma membrane	47.27	50.79
CDY27236	Canola	plasma membrane	45.8	50.23
CDX72159	Canola	plasma membrane	45.8	50.23
PGSC0003DMT400074955	Potato	plasma membrane	46.43	50.23
Solyc06g050790.2.1	Tomato	plasma membrane	45.8	50.11
Bra007225.1-P	Field mustard	plasma membrane	45.59	50.0
AT3G56200.1	Thale cress	plasma membrane	44.96	49.2
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	17.65	49.12
Bra017005.1-P	Field mustard	plastid	45.8	49.1
CDY52929	Canola	plastid	45.8	48.99
CDY27234	Canola	plasma membrane	46.43	48.68
AT2G40420.1	Thale cress	plastid	44.54	48.18
Bra007226.1-P	Field mustard	plasma membrane	42.02	47.85
CDY66186	Canola	plasma membrane, plastid	45.59	47.69
HORVU6Hr1G072350.1	Barley	plasma membrane	44.12	46.88
HORVU7Hr1G065280.2	Barley	plasma membrane	44.54	45.89
HORVU6Hr1G034900.1	Barley	peroxisome	43.07	44.66
HORVU7Hr1G092550.1	Barley	cytosol	41.81	38.42
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	17.86	29.21
KRG90323	Soybean	plasma membrane, vacuole	16.81	27.49
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	35.71	26.36

Protein Annotations

EnsemblPlants:HORVU3Hr1G045630.2	EnsemblPlantsGene:HORVU3Hr1G045630	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF323	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B465CDC
UniProt:A0A287KXP6	MapMan:24.2.3.4.7	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:299540169..299542492

Molecular Weight (calculated)

49667.4 Da

IEP (calculated)

9.497

GRAVY (calculated)

0.779

Length

476 amino acids

Sequence
(BLAST)

001: QISTHPPTSL PSPSSALALL VMASKSSRGP GVATGGSEAE EALLLPEHGA GAPPGNASVL GAVFNVSTSV VGAGIMSIPA AMRVLGVAPA VALIAGVALL
101: ASVAVDFMLR YTRGTPSYAA LMGGSFGRAG AALLNVFIAF NCVGTLTVYL IIIGDVMSGP VGSGEAHAGV LPEWFGPHWW TGRDAVLVAA AVILLPLVLR
201: RRVDSLRYTS AVSILLAAVF MLITMGIAVY TLFTGTAKMP RMLPDFSTLA SPFELFTAVP VIVVAFTFHF NVHPIRAELS KTSDMKSAVR ISLVLCSAIY
301: AAVGFFGFLL FGEATMPDVL ANFDRSSGSG VPQALNDAAR LSYALHLVLV FPLLHYSLRV NVDELLFPGR RPLATDTRRF VALTAALMAA LYALAIAIPS
401: IWTLFQYTGS TFAVCISLIF PGAIVLRDVH GIAKRKDKAM AAMMITLAVI TSSIAIASNV MSSINGEVKG VNAVAS

Best Arabidopsis Sequence Match ( AT3G56200.1 )
(BLAST)

001: MTPQIKTHLL PKQEPSSSEN HGSSTSGIVF NVSTSIIGAG IMSMPAAFKV LGIVPAFLII TIIAWLSTIS VGFLMKSTLA GESTTYAGVM KESFGKTGSI
101: AVQIATMVAT FGCMIIFSII IGDVLSGNEN GGPEHIGVLQ EWFGSYWWNT RIFALLFVYG FVLLPLVLRR RVERLAISSA VSFLLAVLFV VISSVLAISA
201: LVNGQTKNPR LFPELSNGGS FWQLFTASPV IVTAFTFHFN VHPIGFELKD PLQVIPATKI SVILCAAIYF ATGLFGYLLF GDATMSDILV NFDQSSGSSI
301: GSLLNDIVRL SYVLHLMLVF PLLNFSLRAN LDELLYPKKP SLEKDTKRFI GLTLALLICC FLSAIAVPDI WYFFQFMGST ITVSIAFIFP AAIVLRNIHG
401: VSTSREKIVA AIMLVLAVAT SIIAISTNLY SLAAN

Arabidopsis Description

AVT6CAmino acid transporter AVT6C [Source:UniProtKB/Swiss-Prot;Acc:Q9LYM2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.