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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:golgi, mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G065280.2 Barley plasma membrane 63.23 39.83
Os06t0275800-01 Rice plasma membrane 56.01 36.38
EER88229 Sorghum plasma membrane 56.01 35.51
HORVU6Hr1G072350.1 Barley plasma membrane 48.11 31.25
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 42.96 31.17
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 46.05 28.94
Solyc02g089400.2.1 Tomato plasma membrane 45.36 28.7
CDY35776 Canola plasma membrane 43.99 27.95
Bra020737.1-P Field mustard plasma membrane 43.99 27.89
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 43.99 27.83
CDX86347 Canola plasma membrane 43.99 27.83
CDY45907 Canola plasma membrane 43.99 27.83
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 43.99 27.71
VIT_14s0083g00740.t01 Wine grape plasma membrane 43.64 27.49
Zm00001d045740_P001 Maize plasma membrane 54.64 27.46
PGSC0003DMT400068294 Potato plasma membrane 43.3 27.21
CDY00078 Canola plasma membrane 42.27 26.86
PGSC0003DMT400003740 Potato plasma membrane 44.33 26.76
Bra036198.1-P Field mustard plasma membrane 41.92 26.75
AT3G30390.2 Thale cress plasma membrane 42.27 26.74
CDY67720 Canola plasma membrane 41.92 26.64
KRG93742 Soybean plasma membrane 42.27 26.57
AT5G38820.2 Thale cress plasma membrane 41.92 26.46
Solyc02g065680.2.1 Tomato plasma membrane 41.92 26.35
CDY37894 Canola plasma membrane 40.55 26.05
KRH01440 Soybean plasma membrane 40.89 25.59
KRH45158 Soybean plasma membrane 40.89 25.54
HORVU6Hr1G034900.1 Barley peroxisome 40.21 25.49
Bra014071.1-P Field mustard plasma membrane 38.49 25.06
CDY47589 Canola plasma membrane 38.49 24.78
KRG93745 Soybean plasma membrane 39.18 24.57
KRH18319 Soybean plasma membrane 39.18 24.52
CDY17030 Canola plasma membrane 37.46 24.17
HORVU7Hr1G092550.1 Barley cytosol 42.96 24.13
KRH54971 Soybean plasma membrane 38.14 23.62
CDX67416 Canola plasma membrane 35.05 23.18
Bra028420.1-P Field mustard plasma membrane 34.36 22.73
CDY49071 Canola plasma membrane 34.02 22.55
CDX74504 Canola plasma membrane 23.37 20.92
HORVU3Hr1G088360.1 Barley peroxisome, plasma membrane 32.65 20.3
HORVU3Hr1G045630.2 Barley plastid 29.21 17.86
HORVU7Hr1G115450.1 Barley cytosol, peroxisome, plastid 25.43 11.47
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 0.69 1.17
Protein Annotations
EnsemblPlants:HORVU0Hr1G020160.1EnsemblPlantsGene:HORVU0Hr1G020160GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
ncoils:CoilPANTHER:PTHR22950PANTHER:PTHR22950:SF270PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI000B476568UniProt:A0A287E5U2MapMan:24.2.3.4.7:::
Description
No Description!
Coordinates
chrchrUn:-:105859340..105861021
Molecular Weight (calculated)
24475.4 Da
IEP (calculated)
9.262
GRAVY (calculated)
0.534
Length
291 amino acids
Sequence
(BLAST)
001: LSRRICMGRR GLFGGMQFGE ARDQDSNDWI GISWSQHMXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVPGLVMIV LAAFLTDASV ELLMRFSRVV
101: GAPSYGAVMG DAFGWWGRRL LQVCVVVNNV GVMIVYMIII GDVLSGTSSG GEHHYGVLEG WFGTRWWNGR FFVLLVTTLG VFTPLACFKR VDSLSYTSAI
201: SVALAVVFVV ITAGIAIVKL IRGQILMPKL FPAVPDLASV WELFTAXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL QSILKGLTTP L
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.