CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028420.1-P	Field mustard	plasma membrane	98.41	98.41
CDY49071	Canola	plasma membrane	92.05	92.26
CDY47589	Canola	plasma membrane	79.09	76.99
CDY17030	Canola	plasma membrane	78.64	76.72
CDY37894	Canola	plasma membrane	74.09	71.96
CDX74504	Canola	plasma membrane	52.05	70.46
AT5G38820.2	Thale cress	plasma membrane	70.45	67.25
CDY35776	Canola	plasma membrane	65.0	62.45
CDY45907	Canola	plasma membrane	65.0	62.17
CDX86347	Canola	plasma membrane	65.0	62.17
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	65.23	62.12
CDY67720	Canola	plasma membrane	62.95	60.48
CDY00078	Canola	plasma membrane	62.95	60.48
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	23.18	59.65
Solyc02g089400.2.1	Tomato	plasma membrane	61.14	58.48
VIT_14s0083g00740.t01	Wine grape	plasma membrane	61.36	58.44
PGSC0003DMT400068294	Potato	plasma membrane	60.45	57.45
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	51.59	56.61
Solyc02g065680.2.1	Tomato	plasma membrane	59.32	56.37
TraesCS7B01G119000.2	Wheat	plasma membrane	58.41	55.75
TraesCS7A01G212200.2	Wheat	plasma membrane	57.95	55.31
PGSC0003DMT400003740	Potato	plasma membrane	60.45	55.19
TraesCS7D01G213900.1	Wheat	plasma membrane	57.73	55.1
HORVU7Hr1G065280.2	Barley	plasma membrane	57.73	54.98
KRG93742	Soybean	plasma membrane	57.05	54.21
EER88229	Sorghum	plasma membrane	56.36	54.03
Os06t0275800-01	Rice	plasma membrane	54.77	53.79
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	56.59	53.78
KRH45158	Soybean	plasma membrane	56.82	53.65
KRH01440	Soybean	plasma membrane	56.59	53.55
Zm00001d015658_P001	Maize	plasma membrane	54.55	53.22
TraesCS7A01G391600.1	Wheat	plasma membrane	55.23	53.06
TraesCS7D01G387200.1	Wheat	plasma membrane	55.0	52.84
TraesCS7B01G293500.3	Wheat	plasma membrane	55.0	52.84
Os06t0633800-01	Rice	peroxisome	54.55	52.4
KXG29680	Sorghum	plasma membrane	54.09	52.31
TraesCS6D01G270800.1	Wheat	plasma membrane	52.73	52.13
HORVU6Hr1G072350.1	Barley	plasma membrane	52.95	52.01
TraesCS6B01G317700.1	Wheat	plasma membrane	52.5	51.91
TraesCS6A01G288200.1	Wheat	plasma membrane	52.73	51.79
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	53.86	51.63
Os02t0727100-01	Rice	plasma membrane	52.5	51.56
TraesCS6A01G170700.1	Wheat	plasma membrane	52.95	50.87
TraesCS6D01G160400.1	Wheat	peroxisome	52.5	50.44
TraesCS6B01G198900.1	Wheat	peroxisome	52.5	50.44
KRG93745	Soybean	plasma membrane	53.18	50.43
HORVU6Hr1G034900.1	Barley	peroxisome	52.5	50.33
Os02t0191300-01	Rice	cytosol, peroxisome, plasma membrane	52.5	50.33
KRH18319	Soybean	plasma membrane	53.18	50.32
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	54.09	50.11
Zm00001d051703_P001	Maize	plasma membrane	51.36	46.31
HORVU7Hr1G092550.1	Barley	cytosol	54.09	45.95
Zm00001d045740_P001	Maize	plasma membrane	57.73	43.87
KXG30838	Sorghum	plasma membrane	52.05	41.34
CDY27235	Canola	plasma membrane	35.91	38.92
CDY27236	Canola	plasma membrane	37.5	38.02
CDX72159	Canola	plasma membrane	37.05	37.56
CDX79381	Canola	plasma membrane	38.41	36.58
CDY27234	Canola	plasma membrane	37.5	36.34
CDY52929	Canola	plastid	36.36	35.96
CDX67951	Canola	plasma membrane	38.18	35.82
CDY66186	Canola	plasma membrane, plastid	36.36	35.16
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	23.18	35.05
CDX87318	Canola	plasma membrane	37.73	34.3
CDY39969	Canola	plasma membrane	37.5	34.09
CDY37600	Canola	cytosol, peroxisome, plasma membrane	36.36	33.2
CDY38675	Canola	plasma membrane	36.14	32.99

Protein Annotations

EnsemblPlants:CDX67416	EnsemblPlantsGene:GSBRNA2T00098506001	GO:A0A078BS03	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF292
PFAM:PF01490	ProteinID:CDX67416	ProteinID:CDX67416.1	TMHMM:TMhelix	UniParc:UPI0004EDD17B	MapMan:24.2.3.4.7

Description

BnaA07g14560D

Coordinates

chrLK031787:+:111278..112840

Molecular Weight (calculated)

47957.5 Da

IEP (calculated)

8.456

GRAVY (calculated)

0.669

Length

440 amino acids

Sequence
(BLAST)

001: MSSTTDEEVQ NDLKDQLVQR SESDDHAEFK GASFTGAVLN LATTIIGAGI MALPATMKIL GLLPGIVMIV LMAFLTDKTL EILLRFSGIG NASSYGALMQ
101: DSFGRPGRIV LQVAVLVSNI GVLIVYMIII GDAFEDMLKE RLGKSWWDQR TIVLLVTTCV FAPFTACKRI DALRFASATS LALAVVFLVI TGGIVVTKFL
201: SGGLMKPKLL PSFTDLSSVL KLFTVVPVLV NAFICHSNVH NIQNELQDST QIKPVVRSSL IMSSSVYIVT SLFGYLLFGE STHEDVLKNF DTHLKIPYGP
301: VLSDVVRVSY AAHLMLVFPI IFYPLRVNVD GLFFPTAPSL TTSNLRFRSI TAGLIAVIFV GANFIPSIWD AFQLIGATAS VCIGFIFPAA VILKDRHNRA
401: TKMDKTIAIF VIVLAVFSNA IAMYSDVCAL LNKYKSTFPM

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.