CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
endoplasmic reticulum 1
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37894	Canola	plasma membrane	95.08	68.21
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	33.85	64.33
AT5G38820.2	Thale cress	plasma membrane	83.08	58.57
CDY17030	Canola	plasma membrane	77.85	56.1
CDY47589	Canola	plasma membrane	77.23	55.53
CDY35776	Canola	plasma membrane	75.69	53.71
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	65.23	52.87
CDY45907	Canola	plasma membrane	74.77	52.83
CDX86347	Canola	plasma membrane	74.46	52.61
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	74.77	52.6
CDY49071	Canola	plasma membrane	70.77	52.39
CDX67416	Canola	plasma membrane	70.46	52.05
CDY67720	Canola	plasma membrane	72.92	51.75
CDY00078	Canola	plasma membrane	72.62	51.53
Solyc02g089400.2.1	Tomato	plasma membrane	70.77	50.0
VIT_14s0083g00740.t01	Wine grape	plasma membrane	70.77	49.78
PGSC0003DMT400068294	Potato	plasma membrane	69.85	49.03
KRH45158	Soybean	plasma membrane	70.15	48.93
KRH01440	Soybean	plasma membrane	69.85	48.82
Solyc02g065680.2.1	Tomato	plasma membrane	68.92	48.38
KRG93742	Soybean	plasma membrane	67.38	47.3
PGSC0003DMT400003740	Potato	plasma membrane	69.54	46.89
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	65.54	46.0
Os06t0633800-01	Rice	peroxisome	63.69	45.2
Os06t0275800-01	Rice	plasma membrane	62.15	45.09
TraesCS7A01G391600.1	Wheat	plasma membrane	63.38	44.98
TraesCS7B01G293500.3	Wheat	plasma membrane	63.38	44.98
TraesCS7D01G387200.1	Wheat	plasma membrane	63.38	44.98
TraesCS7A01G212200.2	Wheat	plasma membrane	63.69	44.9
TraesCS7B01G119000.2	Wheat	plasma membrane	63.69	44.9
TraesCS7D01G213900.1	Wheat	plasma membrane	63.69	44.9
HORVU7Hr1G065280.2	Barley	plasma membrane	63.69	44.81
TraesCS6D01G270800.1	Wheat	plasma membrane	61.23	44.72
TraesCS6B01G317700.1	Wheat	plasma membrane	61.23	44.72
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	63.08	44.66
HORVU6Hr1G072350.1	Barley	plasma membrane	61.54	44.64
TraesCS6A01G288200.1	Wheat	plasma membrane	61.54	44.64
Zm00001d015658_P001	Maize	plasma membrane	61.54	44.35
EER88229	Sorghum	plasma membrane	62.46	44.23
Os02t0727100-01	Rice	plasma membrane	60.92	44.2
TraesCS6A01G170700.1	Wheat	plasma membrane	61.85	43.89
KXG29680	Sorghum	plasma membrane	61.23	43.74
TraesCS6B01G198900.1	Wheat	peroxisome	61.23	43.45
TraesCS6D01G160400.1	Wheat	peroxisome	61.23	43.45
HORVU6Hr1G034900.1	Barley	peroxisome	61.23	43.36
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	63.08	43.16
KRG93745	Soybean	plasma membrane	61.54	43.1
Os02t0191300-01	Rice	cytosol, peroxisome, plasma membrane	60.62	42.92
KRH18319	Soybean	plasma membrane	61.23	42.8
Zm00001d051703_P001	Maize	plasma membrane	60.92	40.57
HORVU7Hr1G092550.1	Barley	cytosol	62.46	39.19
Zm00001d045740_P001	Maize	plasma membrane	63.38	35.58
KXG30838	Sorghum	plasma membrane	60.62	35.56
CDY27236	Canola	plasma membrane	44.92	33.64
CDX72159	Canola	plasma membrane	44.0	32.95
CDY27235	Canola	plasma membrane	40.92	32.76
CDY52929	Canola	plastid	43.38	31.69
CDY27234	Canola	plasma membrane	44.0	31.5
CDY66186	Canola	plasma membrane, plastid	43.38	30.99
CDX79381	Canola	plasma membrane	38.77	27.27
CDX67951	Canola	plasma membrane	38.46	26.65
CDY38675	Canola	plasma membrane	37.85	25.52
CDY37600	Canola	cytosol, peroxisome, plasma membrane	37.54	25.31
CDY39969	Canola	plasma membrane	37.54	25.21
CDX87318	Canola	plasma membrane	37.23	25.0
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	20.92	23.37

Protein Annotations

EnsemblPlants:CDX74504	EnsemblPlantsGene:GSBRNA2T00114401001	GO:A0A078CEC3	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF292
PFAM:PF01490	ProteinID:CDX74504	ProteinID:CDX74504.1	TMHMM:TMhelix	UniParc:UPI0004EE2F2C	MapMan:24.2.3.4.7

Description

BnaA04g08850D

Coordinates

chrLK031801:-:890763..892374

Molecular Weight (calculated)

35887.9 Da

IEP (calculated)

7.232

GRAVY (calculated)

0.652

Length

325 amino acids

Sequence
(BLAST)

001: MKHSPASKCD VLAGKDEFGI HHAGILEGWF GEYWWNTRTF VLLISTLLVF APLTSFKRID YLRFTSAISL ALAVVFLVIT AGIFFSGGLM MPRLLPNVTD
101: LSSFWRLFTV VPVLVNAYIC HYNVHNIHNE LEDPTQIKPV VRSALTVCSS VYVMTSLFGY LLFGESTLDD VLANFDTDLN IPFGSVLNDA VRFSYAAHLM
201: LVFPIVFYPL RVNIDGLLFP KAPSLATSNL RFGSITAGLI AVIFVGANFI PSIWDAFQFT GATASVCIGF IFPAAVILKD RHNQATKRDK SLAIFVIVLA
301: VFSNAIAIYS DAYALFEKNN STLAI

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.