Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 4
- golgi 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068294 | Potato | plasma membrane | 95.25 | 95.25 |
| Solyc02g089400.2.1 | Tomato | plasma membrane | 84.88 | 85.43 |
| VIT_14s0083g00740.t01 | Wine grape | plasma membrane | 78.19 | 78.36 |
| KRH01440 | Soybean | plasma membrane | 73.43 | 73.12 |
| KRH45158 | Soybean | plasma membrane | 72.35 | 71.89 |
| CDX86347 | Canola | plasma membrane | 69.98 | 70.43 |
| GSMUA_Achr7P20080_001 | Banana | extracellular, plasma membrane, vacuole | 60.91 | 70.32 |
| Bra025416.1-P | Field mustard | mitochondrion, peroxisome, plasma membrane | 69.76 | 70.22 |
| CDY35776 | Canola | plasma membrane | 69.11 | 69.87 |
| CDX85291 | Canola | mitochondrion, peroxisome, plasma membrane | 69.55 | 69.7 |
| CDY45907 | Canola | plasma membrane | 68.9 | 69.35 |
| AT3G30390.2 | Thale cress | plasma membrane | 68.68 | 69.13 |
| Bra020737.1-P | Field mustard | plasma membrane | 68.47 | 69.06 |
| AT5G38820.2 | Thale cress | plasma membrane | 68.68 | 68.98 |
| CDX74504 | Canola | plasma membrane | 48.38 | 68.92 |
| KRG93742 | Soybean | plasma membrane | 68.9 | 68.9 |
| CDY37894 | Canola | plasma membrane | 67.39 | 68.87 |
| CDY00078 | Canola | plasma membrane | 68.03 | 68.78 |
| CDY67720 | Canola | plasma membrane | 67.82 | 68.56 |
| GSMUA_Achr8P24480_001 | Banana | cytosol, golgi, plasma membrane | 68.47 | 68.47 |
| Bra036198.1-P | Field mustard | plasma membrane | 67.39 | 68.42 |
| HORVU0Hr1G020180.1 | Barley | cytosol, plasma membrane | 25.05 | 67.84 |
| KRH18319 | Soybean | plasma membrane | 66.95 | 66.67 |
| KRG93745 | Soybean | plasma membrane | 66.09 | 65.95 |
| TraesCS7A01G212200.2 | Wheat | plasma membrane | 65.66 | 65.94 |
| Os06t0275800-01 | Rice | plasma membrane | 63.71 | 65.85 |
| TraesCS7D01G213900.1 | Wheat | plasma membrane | 65.44 | 65.73 |
| TraesCS7B01G119000.2 | Wheat | plasma membrane | 65.23 | 65.51 |
| TraesCS7A01G391600.1 | Wheat | plasma membrane | 64.79 | 65.5 |
| HORVU6Hr1G072350.1 | Barley | plasma membrane | 63.28 | 65.4 |
| HORVU7Hr1G065280.2 | Barley | plasma membrane | 65.23 | 65.37 |
| EER88229 | Sorghum | plasma membrane | 64.79 | 65.36 |
| Os06t0633800-01 | Rice | peroxisome | 64.36 | 65.07 |
| TraesCS7D01G387200.1 | Wheat | plasma membrane | 64.36 | 65.07 |
| TraesCS7B01G293500.3 | Wheat | plasma membrane | 64.36 | 65.07 |
| TraesCS6B01G317700.1 | Wheat | plasma membrane | 62.42 | 64.94 |
| Zm00001d015658_P001 | Maize | plasma membrane | 63.07 | 64.75 |
| Os02t0727100-01 | Rice | plasma membrane | 62.63 | 64.73 |
| TraesCS6D01G270800.1 | Wheat | plasma membrane | 62.2 | 64.72 |
| KXG29680 | Sorghum | plasma membrane | 63.28 | 64.4 |
| TraesCS6A01G288200.1 | Wheat | plasma membrane | 62.2 | 64.29 |
| Bra014071.1-P | Field mustard | plasma membrane | 61.99 | 64.21 |
| EER88687 | Sorghum | cytosol, peroxisome, plasma membrane | 63.5 | 64.05 |
| Solyc04g077460.2.1 | Tomato | plasma membrane | 61.99 | 63.64 |
| Os02t0191300-01 | Rice | cytosol, peroxisome, plasma membrane | 62.42 | 62.96 |
| HORVU6Hr1G034900.1 | Barley | peroxisome | 62.2 | 62.75 |
| TraesCS6B01G198900.1 | Wheat | peroxisome | 61.99 | 62.66 |
| TraesCS6D01G160400.1 | Wheat | peroxisome | 61.77 | 62.45 |
| TraesCS6A01G170700.1 | Wheat | plasma membrane | 61.77 | 62.45 |
| CDY17030 | Canola | plasma membrane | 60.48 | 62.08 |
| Zm00001d046661_P003 | Maize | golgi, peroxisome, plasma membrane | 63.5 | 61.89 |
| CDY47589 | Canola | plasma membrane | 59.83 | 61.28 |
| Zm00001d051703_P001 | Maize | plasma membrane | 63.71 | 60.45 |
| CDY49071 | Canola | plasma membrane | 56.37 | 59.45 |
| CDX67416 | Canola | plasma membrane | 56.37 | 59.32 |
| Bra028420.1-P | Field mustard | plasma membrane | 55.72 | 58.64 |
| HORVU7Hr1G092550.1 | Barley | cytosol | 63.07 | 56.37 |
| Solyc09g059850.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 13.82 | 53.33 |
| KXG30838 | Sorghum | plasma membrane | 62.63 | 52.35 |
| Zm00001d045740_P001 | Maize | plasma membrane | 64.79 | 51.81 |
| Solyc05g052300.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 42.98 | 45.43 |
| Solyc06g050790.2.1 | Tomato | plasma membrane | 42.55 | 45.29 |
| Solyc09g059880.1.1 | Tomato | extracellular | 10.58 | 42.24 |
| Solyc06g050800.2.1 | Tomato | plasma membrane | 39.96 | 42.24 |
| HORVU0Hr1G020160.1 | Barley | golgi, mitochondrion | 26.35 | 41.92 |
| Solyc03g117350.1.1 | Tomato | plasma membrane | 41.9 | 41.1 |
Protein Annotations
| EnsemblPlants:Solyc02g065680.2.1 | EnsemblPlantsGene:Solyc02g065680.2 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF292 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002768DED |
| UniProt:K4B700 | MapMan:24.2.3.4.7 | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:36842710..36846139
Molecular Weight (calculated)
50343.1 Da
IEP (calculated)
8.198
GRAVY (calculated)
0.663
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIGSLKQVK EKKSRNNKQA VVDEQSPLLP TKHKEDAGFD EFDGASFSGA VFNLSTTIVG AGIMALPATM KSLGLIPGIA MIIFTAFLTE ASIELLIRFS
101: RTSKATSYGG LMGDTFGKYG KMLLQICILV NNIGVLVVYM IIIGDVLSGT NSNGVHHAGV LEGWFGIHWW NSRFFILLVT TLGIFAPLAS LKRIDSLRFT
201: SALSVALAVV FLVVIVGITL FKLMSGSIHM PRLFSDVYDI TSFLKLFTVV PVLVTAYICH YNVHSIENEL EDRTQIRAVV KSSLALCSSV YVLTSLFGFL
301: LFGDATLDDV LANFDTNLGI PLGSLLNDVV RVSYAAHLML VFPVVFYPLR LNLDGLLFPS ARPLTSDNLR FASISSGLIA IIFLGANFIP SIWDAFQFTG
401: ATAAVCIGYI FPASVTLRDP YGIATKKDKI LCIFMIVIAV FSNVVAIYSD AYSLIKKNSS PSE
101: RTSKATSYGG LMGDTFGKYG KMLLQICILV NNIGVLVVYM IIIGDVLSGT NSNGVHHAGV LEGWFGIHWW NSRFFILLVT TLGIFAPLAS LKRIDSLRFT
201: SALSVALAVV FLVVIVGITL FKLMSGSIHM PRLFSDVYDI TSFLKLFTVV PVLVTAYICH YNVHSIENEL EDRTQIRAVV KSSLALCSSV YVLTSLFGFL
301: LFGDATLDDV LANFDTNLGI PLGSLLNDVV RVSYAAHLML VFPVVFYPLR LNLDGLLFPS ARPLTSDNLR FASISSGLIA IIFLGANFIP SIWDAFQFTG
401: ATAAVCIGYI FPASVTLRDP YGIATKKDKI LCIFMIVIAV FSNVVAIYSD AYSLIKKNSS PSE
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.