Factsheet for TraesCS7A01G391600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G293500.3	Wheat	plasma membrane	99.34	99.34
TraesCS7D01G387200.1	Wheat	plasma membrane	99.13	99.13
Os06t0633800-01	Rice	peroxisome	90.83	90.83
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	89.08	88.89
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	89.08	85.89
HORVU7Hr1G092550.1	Barley	cytosol	96.94	85.71
TraesCS6A01G170700.1	Wheat	plasma membrane	84.72	84.72
TraesCS7A01G212200.2	Wheat	plasma membrane	68.12	67.68
VIT_14s0083g00740.t01	Wine grape	plasma membrane	67.69	67.1
Solyc02g089400.2.1	Tomato	plasma membrane	65.5	65.22
PGSC0003DMT400068294	Potato	plasma membrane	65.72	65.01
Solyc02g065680.2.1	Tomato	plasma membrane	65.5	64.79
KRH01440	Soybean	plasma membrane	64.63	63.66
CDX74504	Canola	plasma membrane	44.98	63.38
CDY35776	Canola	plasma membrane	63.1	63.1
TraesCS6A01G288200.1	Wheat	plasma membrane	61.57	62.95
KRG93742	Soybean	plasma membrane	63.54	62.85
CDY45907	Canola	plasma membrane	63.1	62.83
AT3G30390.2	Thale cress	plasma membrane	63.1	62.83
Bra020737.1-P	Field mustard	plasma membrane	62.88	62.75
KRH45158	Soybean	plasma membrane	63.54	62.45
CDY37894	Canola	plasma membrane	61.57	62.25
AT5G38820.2	Thale cress	plasma membrane	62.23	61.82
CDX86347	Canola	plasma membrane	62.01	61.74
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	62.01	61.74
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	62.01	61.47
PGSC0003DMT400003740	Potato	plasma membrane	63.97	60.79
CDY00078	Canola	plasma membrane	60.26	60.26
Bra036198.1-P	Field mustard	plasma membrane	59.61	59.87
CDY67720	Canola	plasma membrane	59.83	59.83
KRH18319	Soybean	plasma membrane	60.7	59.78
KRG93745	Soybean	plasma membrane	60.48	59.7
Bra014071.1-P	Field mustard	plasma membrane	56.77	58.17
CDY17030	Canola	plasma membrane	56.55	57.43
CDY47589	Canola	plasma membrane	55.68	56.42
CDY49071	Canola	plasma membrane	53.06	55.35
KRH54971	Soybean	plasma membrane	56.77	55.32
CDX67416	Canola	plasma membrane	53.06	55.23
Bra028420.1-P	Field mustard	plasma membrane	52.62	54.77
TraesCS3A01G346700.1	Wheat	plasma membrane	44.1	44.01
TraesCS7A01G517100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	38.65	36.42

Protein Annotations

EnsemblPlants:TraesCS7A01G391600.1	EnsemblPlantsGene:TraesCS7A01G391600	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF292	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.7	:	:	:

Description

No Description!

Coordinates

chr7A:-:567583585..567585762

Molecular Weight (calculated)

49760.3 Da

IEP (calculated)

6.603

GRAVY (calculated)

0.711

Length

458 amino acids

Sequence
(BLAST)

001: MGVGNGSADT NQQTARNEIR DETTPLLPVK VEEEGFHEFN GASFSGAVFN LSTTIVGAGI MALPASIKML GLIPGLLMII FVALLTEASI DMLIRCSHQG
101: KITSYGWLMG EAYGQWGRIA LQASVVINNI GVMIVYMIII GDVLSGTSSG GVHHRGILEG WFGAHLWNSR AIVLLVTTLF VFAPLVSFKR LDSLSYTSAL
201: SVALAVVFVV ITAGIAIIKV ISGTVAMPKL FPEIDDLSSV WKLFTAVPVL VTAYICHYNV HSIDNELEDK TQTKPIVRTS LALCSSVYIA TSFFAYLLFG
301: DGTLDDVLAN FDSNLGIPFS SVFNDVVRVS YAAHVMLVFP IVFFALRLNL DGLLFPTSRH ISYDNKRFTI ITISLLVVIY TAAIFIPSIW DAFQFTGATA
401: AVLIGFIFPA MVILRDPYGI ATKRDKILAV TMIVLAVVSN SVALYSDAMN IFRRKEVA

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.