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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g089400.2.1 Tomato plasma membrane 91.49 95.87
PGSC0003DMT400068294 Potato plasma membrane 82.78 86.18
VIT_14s0083g00740.t01 Wine grape plasma membrane 76.56 79.87
KRH01440 Soybean plasma membrane 70.12 72.69
KRH45158 Soybean plasma membrane 69.92 72.32
CDY35776 Canola plasma membrane 68.26 71.83
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 68.46 71.74
CDX86347 Canola plasma membrane 68.46 71.74
CDY45907 Canola plasma membrane 68.46 71.74
Bra020737.1-P Field mustard plasma membrane 68.05 71.46
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 68.26 71.21
AT3G30390.2 Thale cress plasma membrane 67.84 71.09
Bra036198.1-P Field mustard plasma membrane 66.39 70.18
CDY67720 Canola plasma membrane 66.6 70.09
AT5G38820.2 Thale cress plasma membrane 66.81 69.85
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 58.09 69.83
CDY00078 Canola plasma membrane 66.18 69.65
KRG93742 Soybean plasma membrane 66.81 69.55
CDX74504 Canola plasma membrane 46.89 69.54
CDY37894 Canola plasma membrane 63.9 67.99
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 65.15 67.82
KRH18319 Soybean plasma membrane 64.94 67.31
KRG93745 Soybean plasma membrane 64.73 67.24
TraesCS7A01G212200.2 Wheat plasma membrane 63.9 66.81
TraesCS7D01G213900.1 Wheat plasma membrane 63.69 66.59
HORVU7Hr1G065280.2 Barley plasma membrane 63.69 66.45
TraesCS7B01G119000.2 Wheat plasma membrane 63.49 66.38
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 23.44 66.08
PGSC0003DMT400012670 Potato plasma membrane 54.56 66.08
Os06t0275800-01 Rice plasma membrane 61.2 65.85
EER88229 Sorghum plasma membrane 62.24 65.36
PGSC0003DMT400012672 Potato plasma membrane 60.79 64.97
TraesCS7D01G387200.1 Wheat plasma membrane 61.0 64.19
TraesCS7B01G293500.3 Wheat plasma membrane 61.0 64.19
Os06t0633800-01 Rice peroxisome 61.0 64.19
TraesCS7A01G391600.1 Wheat plasma membrane 60.79 63.97
Bra014071.1-P Field mustard plasma membrane 59.13 63.76
Zm00001d015658_P001 Maize plasma membrane 59.54 63.64
KXG29680 Sorghum plasma membrane 59.96 63.52
HORVU6Hr1G072350.1 Barley plasma membrane 58.92 63.39
TraesCS6B01G317700.1 Wheat plasma membrane 58.51 63.37
EER88687 Sorghum cytosol, peroxisome, plasma membrane 60.17 63.18
Os02t0727100-01 Rice plasma membrane 58.71 63.17
TraesCS6D01G270800.1 Wheat plasma membrane 58.3 63.15
TraesCS6A01G288200.1 Wheat plasma membrane 58.51 62.95
CDY17030 Canola plasma membrane 58.71 62.75
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 59.75 62.75
TraesCS6A01G170700.1 Wheat plasma membrane 59.34 62.45
HORVU6Hr1G034900.1 Barley peroxisome 59.34 62.31
TraesCS6B01G198900.1 Wheat peroxisome 59.13 62.23
TraesCS6D01G160400.1 Wheat peroxisome 58.92 62.01
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 60.37 61.26
CDY47589 Canola plasma membrane 57.05 60.84
CDY49071 Canola plasma membrane 55.39 60.82
CDX67416 Canola plasma membrane 55.19 60.45
Bra028420.1-P Field mustard plasma membrane 54.36 59.55
Zm00001d051703_P001 Maize plasma membrane 60.17 59.43
HORVU7Hr1G092550.1 Barley cytosol 59.34 55.21
KXG30838 Sorghum plasma membrane 59.96 52.17
Zm00001d045740_P001 Maize plasma membrane 62.24 51.81
PGSC0003DMT400030399 Potato plasma membrane 42.74 47.03
PGSC0003DMT400074955 Potato plasma membrane 41.49 45.45
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 26.76 44.33
PGSC0003DMT400036836 Potato plasma membrane 41.91 42.8
PGSC0003DMT400074952 Potato plasma membrane 38.8 42.5
Protein Annotations
EnsemblPlants:PGSC0003DMT400003740EnsemblPlantsGene:PGSC0003DMG400001474GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF270PFAM:PF01490PGSC:PGSC0003DMG400001474SEG:segTMHMM:TMhelix
UniParc:UPI000295A1C2UniProt:M0ZM93MapMan:24.2.3.4.7:::
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400001474]
Coordinates
chr2:+:45187534..45192800
Molecular Weight (calculated)
52642.1 Da
IEP (calculated)
8.774
GRAVY (calculated)
0.661
Length
482 amino acids
Sequence
(BLAST)
001: MTIGSIRPVK EKKSRKNKQP VVDDQSPLLP TKHQEDGFNG ASYSGAVFNL STTIVGAGIM ALPATMKVLG LIPGIIMIIL MAFLTEASVE LLIRFSRTSN
101: SVSYGGLMGD AFGNYGKMLL QICILVNNIG VLIVYMIIIG DVLSGTTSSG THHAGVLEGW FGVHWWNGRF FVLLVTTLGV FAPLACLKRI DSLRYTSTLS
201: VALAIVFLVV TVGITIFKLI NGSILNPRLL PSFYDLTSFL KLFTVVPVMV TAYICHYNVV NGNLTVHPSC YNIRLNKCTY AVHSIENELE ESRQIRSVVQ
301: SALALCSSVY VLTSIFGFLL FGDATLDDVL ANFDADLGIP FGSFLNDVVR VSYAAHLMLV FPIVFYPLRL NLDGLVFPSA RPLTLDNLRF ALISGGLIAI
401: IFLGANFIPS IWDAFQFTGA TAAVCIGFIF PAAVTLRDRY GIATKRDKIL SIFMIVLAVF SNMVAIYSDA YALFKKNSSP RE
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.