Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG30838 Sorghum plasma membrane 93.03 81.95
Os02t0727100-01 Rice plasma membrane 73.16 79.69
TraesCS6B01G317700.1 Wheat plasma membrane 70.29 77.08
TraesCS6D01G270800.1 Wheat plasma membrane 70.29 77.08
HORVU6Hr1G072350.1 Barley plasma membrane 70.29 76.56
TraesCS6A01G288200.1 Wheat plasma membrane 70.08 76.34
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 56.56 68.83
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 63.11 66.52
PGSC0003DMT400068294 Potato plasma membrane 61.07 64.36
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 60.66 64.35
CDX86347 Canola plasma membrane 60.66 64.35
Solyc02g089400.2.1 Tomato plasma membrane 60.45 64.13
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 60.66 64.07
Solyc02g065680.2.1 Tomato plasma membrane 60.45 63.71
VIT_14s0083g00740.t01 Wine grape plasma membrane 60.25 63.64
CDY35776 Canola plasma membrane 59.63 63.54
AT3G30390.2 Thale cress plasma membrane 59.84 63.48
CDY45907 Canola plasma membrane 59.63 63.26
Zm00001d015658_P001 Maize plasma membrane 58.4 63.19
Bra020737.1-P Field mustard plasma membrane 59.43 63.18
Bra036198.1-P Field mustard plasma membrane 58.4 62.5
CDY00078 Canola plasma membrane 58.61 62.45
CDY67720 Canola plasma membrane 58.4 62.23
KRH01440 Soybean plasma membrane 58.4 61.29
KRH45158 Soybean plasma membrane 58.2 60.94
CDY37894 Canola plasma membrane 56.56 60.93
CDX74504 Canola plasma membrane 40.57 60.92
PGSC0003DMT400003740 Potato plasma membrane 59.43 60.17
KRG93742 Soybean plasma membrane 56.76 59.83
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 58.2 59.79
AT5G38820.2 Thale cress plasma membrane 55.33 58.57
KRG93745 Soybean plasma membrane 55.33 58.19
KRH18319 Soybean plasma membrane 55.33 58.06
KRH54971 Soybean plasma membrane 53.89 55.96
Bra014071.1-P Field mustard plasma membrane 51.02 55.7
CDY17030 Canola plasma membrane 51.23 55.43
CDY47589 Canola plasma membrane 51.02 55.09
Zm00001d045740_P001 Maize plasma membrane 64.75 54.58
CDY49071 Canola plasma membrane 46.72 51.94
CDX67416 Canola plasma membrane 46.31 51.36
Bra028420.1-P Field mustard plasma membrane 45.7 50.68
Zm00001d046586_P001 Maize plasma membrane 35.86 35.93
Zm00001d030531_P001 Maize extracellular, plasma membrane, vacuole 12.7 33.7
Zm00001d012485_P001 Maize golgi, plasma membrane, plastid 45.49 33.33
Protein Annotations
EnsemblPlants:Zm00001d051703_P001EnsemblPlants:Zm00001d051703_T001EnsemblPlantsGene:Zm00001d051703GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF270PFAM:PF01490ProteinID:AQK55014.1SEG:seg
TMHMM:TMhelixUniParc:UPI000842FB86UniProt:A0A1D6Q9G5MapMan:24.2.3.4.7::
Description
Transmembrane amino acid transporter family protein
Coordinates
chr4:-:167221261..167223549
Molecular Weight (calculated)
52459.5 Da
IEP (calculated)
8.394
GRAVY (calculated)
0.566
Length
488 amino acids
Sequence
(BLAST)
001: MREDLHISVQ RGTGGNWKLE FRPRRPHRPC NEPGFGGALA RMVMPISSGG DHHGAEPLLP EKQRGGGAGA DDAGDDFHGA SFSGAVFNLS TTIVGAGIMA
101: LPATMKVLGL VPGLALIALS ALLTDASIEL LVRFNRAAGV RTYGKTMGDA FGVLGRGLLQ LCVVVNNVGI LVVYMIIIGD VLSGTSSSGV HHHGVLEGWF
201: GENRWNGRFA ILAIATLGVF TPLACVKRVD SLRYTSALSV ALAVVFVVIT AGIAMFKLAR GQILMPRLFA DVHDWPSIWR LFTAAPVLVT AYICHYNVLP
301: IYKELKDSSQ ITPIVRTSLL LCSVVYVTTS FFGFLLFGDS TLDDVLANFD TDLGIPYSSI FNDAVRVSYV LHLMLVFPIV FQALRLNMDG LLFPSARPLP
401: CDNRRFGGLT AALLVVIFLA ANFIPNIWDA FQFTGATASV CVAYIFPAAI TLRDPHGIAK KRDKVLAVFM IVLAVVANTV AVYSDACS
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.