Factsheet for Zm00001d015658_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29680	Sorghum	plasma membrane	96.45	95.6
Os02t0191300-01	Rice	cytosol, peroxisome, plasma membrane	86.25	84.75
TraesCS6A01G170700.1	Wheat	plasma membrane	85.59	84.28
HORVU6Hr1G034900.1	Barley	peroxisome	85.59	84.1
TraesCS6B01G198900.1	Wheat	peroxisome	85.37	84.06
TraesCS6D01G160400.1	Wheat	peroxisome	84.92	83.62
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	83.59	79.37
VIT_14s0083g00740.t01	Wine grape	plasma membrane	65.85	64.29
PGSC0003DMT400068294	Potato	plasma membrane	65.63	63.93
Solyc02g089400.2.1	Tomato	plasma membrane	64.52	63.26
Solyc02g065680.2.1	Tomato	plasma membrane	64.75	63.07
CDX74504	Canola	plasma membrane	44.35	61.54
KRH01440	Soybean	plasma membrane	62.97	61.08
CDY35776	Canola	plasma membrane	61.86	60.92
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	62.08	60.87
AT3G30390.2	Thale cress	plasma membrane	62.08	60.87
CDX86347	Canola	plasma membrane	62.08	60.87
KRG93742	Soybean	plasma membrane	62.31	60.69
CDY45907	Canola	plasma membrane	61.86	60.65
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	62.08	60.61
Bra020737.1-P	Field mustard	plasma membrane	61.64	60.57
KRH45158	Soybean	plasma membrane	62.53	60.52
CDY37894	Canola	plasma membrane	60.75	60.49
PGSC0003DMT400003740	Potato	plasma membrane	63.64	59.54
CDY00078	Canola	plasma membrane	60.31	59.39
AT5G38820.2	Thale cress	plasma membrane	60.53	59.22
Bra036198.1-P	Field mustard	plasma membrane	59.65	58.99
CDY67720	Canola	plasma membrane	59.87	58.95
KRG93745	Soybean	plasma membrane	60.31	58.62
Zm00001d051703_P001	Maize	plasma membrane	63.19	58.4
KRH18319	Soybean	plasma membrane	59.65	57.85
Bra014071.1-P	Field mustard	plasma membrane	56.98	57.49
CDY17030	Canola	plasma membrane	56.98	56.98
CDY47589	Canola	plasma membrane	56.32	56.19
KRH54971	Soybean	plasma membrane	57.87	55.53
CDY49071	Canola	plasma membrane	53.44	54.9
CDX67416	Canola	plasma membrane	53.22	54.55
Bra028420.1-P	Field mustard	plasma membrane	52.99	54.32
Zm00001d045740_P001	Maize	plasma membrane	66.96	52.16
Zm00001d046586_P001	Maize	plasma membrane	37.03	34.29
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	45.23	30.63
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	11.97	29.35

Protein Annotations

EnsemblPlants:Zm00001d015658_P001	EnsemblPlants:Zm00001d015658_T001	EnsemblPlantsGene:Zm00001d015658	EntrezGene:100193855	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF239	PFAM:PF01490	ProteinID:AQK69256.1
ProteinID:AQK69258.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000220DE01	UniProt:A0A1D6H345	MapMan:24.2.3.4.7

Description

Transmembrane amino acid transporter family protein

Coordinates

chr5:-:103850842..103855288

Molecular Weight (calculated)

49081.8 Da

IEP (calculated)

6.674

GRAVY (calculated)

0.770

Length

451 amino acids

Sequence
(BLAST)

001: MGSSRNVPHK VMQDEITPLL PIKAEEDAVH EFDGASFSGA VFNLSTTIVG AGIMALPASI KMLGLIPGIL MIILVALLTE TSIDMLVRCS HQGKITSYGW
101: LMGDTFGQWG RIALQASVVI NNVGVLIVYM IIIGDVLSGT SSTGVHHSGV LEGWFGPHMW NSRPIVLLAT TLLVFAPLVS FKRLDSLRYT SALSVALAVV
201: FVVITAGVAI VRLIQGTVEI PKLFPEIDGV SSVWKLFTAV PVLVTAYICH YNVHSIDNEL EDKTQIKPIV QTSLGLCSSV YIATSFFAYL LFGEATLADV
301: LANFDSDLRI PLSSAFNDIV RVSYVVHIML VFPIVFFALR LNLDGLLFPT ARHISGDNKR FTIITISLIA VIYLAAIFIP SIWDAFQFTG ATAAVLIGFI
401: FPAMIILRDP YGVSTKRDKV LAVTMIVLAV VSNCVALYSD AFNIFYRKQE A

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.