Factsheet for HORVU6Hr1G072350.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G317700.1	Wheat	plasma membrane	96.21	96.85
TraesCS6D01G270800.1	Wheat	plasma membrane	95.98	96.63
TraesCS6A01G288200.1	Wheat	plasma membrane	96.21	96.21
Os02t0727100-01	Rice	plasma membrane	81.25	81.25
Zm00001d051703_P001	Maize	plasma membrane	76.56	70.29
HORVU7Hr1G065280.2	Barley	plasma membrane	71.43	69.26
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	26.12	68.42
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	61.16	68.33
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	66.96	64.79
PGSC0003DMT400068294	Potato	plasma membrane	66.52	64.36
Bra025416.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane	65.4	63.7
CDX86347	Canola	plasma membrane	65.4	63.7
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	65.4	63.42
Solyc02g065680.2.1	Tomato	plasma membrane	65.4	63.28
AT3G30390.2	Thale cress	plasma membrane	64.96	63.26
CDY35776	Canola	plasma membrane	64.51	63.1
CDY45907	Canola	plasma membrane	64.51	62.83
Bra020737.1-P	Field mustard	plasma membrane	64.29	62.75
Solyc02g089400.2.1	Tomato	plasma membrane	64.29	62.61
HORVU6Hr1G034900.1	Barley	peroxisome	63.84	62.31
VIT_14s0083g00740.t01	Wine grape	plasma membrane	64.06	62.12
KXG30838	Sorghum	plasma membrane	76.79	62.09
Bra036198.1-P	Field mustard	plasma membrane	62.72	61.62
CDX74504	Canola	plasma membrane	44.64	61.54
CDY67720	Canola	plasma membrane	62.72	61.35
CDY00078	Canola	plasma membrane	62.72	61.35
KRH01440	Soybean	plasma membrane	62.95	60.65
KRH45158	Soybean	plasma membrane	62.72	60.3
KRG93742	Soybean	plasma membrane	61.61	59.61
AT5G38820.2	Thale cress	plasma membrane	61.16	59.44
CDY37894	Canola	plasma membrane	60.04	59.38
PGSC0003DMT400003740	Potato	plasma membrane	63.39	58.92
KRG93745	Soybean	plasma membrane	59.6	57.54
KRH18319	Soybean	plasma membrane	59.15	56.99
Bra014071.1-P	Field mustard	plasma membrane	55.36	55.48
CDY17030	Canola	plasma membrane	55.8	55.43
CDY47589	Canola	plasma membrane	55.36	54.87
KRH54971	Soybean	plasma membrane	57.37	54.68
HORVU7Hr1G092550.1	Barley	cytosol	62.95	54.44
CDY49071	Canola	plasma membrane	52.01	53.08
CDX67416	Canola	plasma membrane	52.01	52.95
Bra028420.1-P	Field mustard	plasma membrane	51.79	52.73
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	31.25	48.11
HORVU3Hr1G088360.1	Barley	peroxisome, plasma membrane	48.88	46.79
HORVU3Hr1G045630.2	Barley	plastid	46.88	44.12
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	41.96	29.15

Protein Annotations

EnsemblPlants:HORVU6Hr1G072350.1	EnsemblPlantsGene:HORVU6Hr1G072350	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF270	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B465DDB
UniProt:A0A287UMP0	MapMan:24.2.3.4.7	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:502959206..502968928

Molecular Weight (calculated)

47852.9 Da

IEP (calculated)

7.100

GRAVY (calculated)

0.670

Length

448 amino acids

Sequence
(BLAST)

001: MVMPMASAGD GQDTEARRPL LARRHKESED GLDDGGDASF SGAVFNLSTT IVGAGIMALP ATMRVLGLVP GLTLVVLAAV LTDASIELLM RFSNAVGAAS
101: YGEAMGDSFG ALGRGLLQLC VVVNNIGVMV VYMIIIGDVL SGTSSSGKHH HGVFEGWFGP NRWNGRFAIL LITTLAVFAP LTCFKRVDSL KYTSALSVAL
201: AVVFVVITAG IAMIKLTRGQ IPMPMLFPDV HGTWASIFKL FTAAPVLVTA FICHYNVHPI HNELKDPAQI RPIVRASLVL CSTVYVTTSF FGFLLFGEET
301: LDDVLANFDS DLGIPYGGVF NDAVRVSYAL HLMLVFPIVF HALRLNMDGL LFPSARPLAC DNRRFAVLTA ALLAVIFLAA NFIPNIWDAF QFTGATAAVS
401: IAYIFPAGMA LRDRHGIAKK GDKVLALFMI VIATVSNGVA VYSDASSL

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.