CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 4
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14885	Soybean	plasma membrane	51.55	33.86
KRH73229	Soybean	plasma membrane	49.14	32.43
Solyc06g050790.2.1	Tomato	plasma membrane	37.11	24.83
PGSC0003DMT400074955	Potato	plasma membrane	36.43	24.09
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	14.43	22.83
KRH31212	Soybean	plastid	32.65	21.79
KRG97662	Soybean	plastid	32.3	21.56
GSMUA_Achr7P22240_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	32.3	20.84
KRH14877	Soybean	plasma membrane	30.58	20.6
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	30.58	20.51
KRH45158	Soybean	plasma membrane	31.62	19.74
KRH01440	Soybean	plasma membrane	30.93	19.35
KRG93742	Soybean	plasma membrane	28.87	18.14
Os01t0825800-01	Rice	plasma membrane	28.18	17.98
HORVU3Hr1G088360.1	Barley	peroxisome, plasma membrane	28.52	17.73
KRG93745	Soybean	plasma membrane	27.84	17.46
KRH15469	Soybean	plasma membrane	26.8	17.22
TraesCS3B01G378500.1	Wheat	plasma membrane	26.8	17.03
TraesCS3D01G340400.1	Wheat	plasma membrane	26.8	16.99
KRH18319	Soybean	plasma membrane	27.15	16.99
KXG33635	Sorghum	plasma membrane	27.15	16.99
HORVU3Hr1G045630.2	Barley	plastid	27.49	16.81
TraesCS3A01G346700.1	Wheat	plasma membrane	26.46	16.78
KRH54971	Soybean	plasma membrane	26.8	16.6
KRH09698	Soybean	plasma membrane	20.62	14.32
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	21.99	13.2
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	27.84	12.16

Protein Annotations

EMBL:ACUP02012601	EnsemblPlants:KRG90323	EnsemblPlantsGene:GLYMA_20G083100	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR22950	PANTHER:PTHR22950:SF289	ProteinID:KRG90323	ProteinID:KRG90323.1	TMHMM:TMhelix	UniParc:UPI000295B8F9
UniProt:K7N2B2	MapMan:24.2.3.4.7	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:31335274..31338081

Molecular Weight (calculated)

32393.0 Da

IEP (calculated)

4.836

GRAVY (calculated)

0.663

Length

291 amino acids

Sequence
(BLAST)

001: MNLVYYDESI LLALASAVGH PIKVDNNMKD FRRDHFACVC IDVDLTKPVV GRVAREYFNL ACLERDYQDR LFIYVDDALN TTVPNGFSGV VVDLFSKGSL
101: IPKLQDLATW RMLGGDVTVE FMLRYTSSGK SSTYVGMMVE SFGSIGSLAI KICVIITNLG VLIIYFIILG DVLCGNESND IAHLGILQDW FGINWLTSRA
201: FALLFVALFI MVPLVMLRRV ALVFVVICSS MAISALLSGK SQTPRIVPDF SQVTVIYLFT TIPVFVMGSD SMPMSFYSLV IDYQIVVIDY Q

Best Arabidopsis Sequence Match ( AT3G56200.1 )
(BLAST)

001: MTPQIKTHLL PKQEPSSSEN HGSSTSGIVF NVSTSIIGAG IMSMPAAFKV LGIVPAFLII TIIAWLSTIS VGFLMKSTLA GESTTYAGVM KESFGKTGSI
101: AVQIATMVAT FGCMIIFSII IGDVLSGNEN GGPEHIGVLQ EWFGSYWWNT RIFALLFVYG FVLLPLVLRR RVERLAISSA VSFLLAVLFV VISSVLAISA
201: LVNGQTKNPR LFPELSNGGS FWQLFTASPV IVTAFTFHFN VHPIGFELKD PLQVIPATKI SVILCAAIYF ATGLFGYLLF GDATMSDILV NFDQSSGSSI
301: GSLLNDIVRL SYVLHLMLVF PLLNFSLRAN LDELLYPKKP SLEKDTKRFI GLTLALLICC FLSAIAVPDI WYFFQFMGST ITVSIAFIFP AAIVLRNIHG
401: VSTSREKIVA AIMLVLAVAT SIIAISTNLY SLAAN

Arabidopsis Description

AVT6CAmino acid transporter AVT6C [Source:UniProtKB/Swiss-Prot;Acc:Q9LYM2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.