CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73229	Soybean	plasma membrane	94.13	94.56
Solyc06g050790.2.1	Tomato	plasma membrane	61.4	62.53
PGSC0003DMT400074955	Potato	plasma membrane	61.63	62.05
KRH31212	Soybean	plastid	54.4	55.28
KRG97662	Soybean	plastid	53.72	54.59
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	51.92	53.0
GSMUA_Achr7P22240_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	53.95	52.99
KRH14877	Soybean	plasma membrane	51.24	52.55
KRG90323	Soybean	plasma membrane, vacuole	33.86	51.55
HORVU3Hr1G088360.1	Barley	peroxisome, plasma membrane	52.82	50.0
Os01t0825800-01	Rice	plasma membrane	51.02	49.56
TraesCS3B01G378500.1	Wheat	plasma membrane	50.79	49.13
TraesCS3D01G340400.1	Wheat	plasma membrane	50.79	49.02
TraesCS3A01G346700.1	Wheat	plasma membrane	50.79	49.02
KXG33635	Sorghum	plasma membrane	50.34	47.96
HORVU3Hr1G045630.2	Barley	plastid	50.79	47.27
KRH01440	Soybean	plasma membrane	46.05	43.87
KRH45158	Soybean	plasma membrane	45.6	43.35
KRH54971	Soybean	plasma membrane	44.7	42.13
KRG93742	Soybean	plasma membrane	43.57	41.68
KRG93745	Soybean	plasma membrane	42.89	40.95
KRH18319	Soybean	plasma membrane	42.66	40.65
KRH15469	Soybean	plasma membrane	41.53	40.62
KRH09698	Soybean	plasma membrane	35.67	37.71
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	51.02	33.93
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	36.34	33.2
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	12.42	29.89

Protein Annotations

EntrezGene:100805650	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:ACUP02008540	EnsemblPlantsGene:GLYMA_14G054800	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	UniProt:I1M7N7	EnsemblPlants:KRH14885	ProteinID:KRH14885	ProteinID:KRH14885.1
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF323	TMHMM:TMhelix	UniParc:UPI000233B155	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:4371660..4376414

Molecular Weight (calculated)

47840.5 Da

IEP (calculated)

6.873

GRAVY (calculated)

0.828

Length

443 amino acids

Sequence
(BLAST)

001: MKLEESVSNS NITAPLLPPE DPSPSPQNGS ISGAVFNITT TMIGAGIMSI PATMKVLGIV PGLVVIVLVA LITDVTVEFM LRYTSSGKSS TYAGMMAESF
101: GSIGSLAVKI CVIITNLGVL IIYFIILGDV LCGNESNGIT HLGILQEWFG INWLTSRAFA LLFVALFIML PLVMLRRVDS LRYSSAISIL LALVFVVICS
201: SMAVSALLSG KSQTPRIVPD FSQVTVLDLF TTIPVFVTGF GFHVNVHPIR AELIKVEHMG LAARISLIIC VAIYFAIGFF GYLLFGDSIM PDVLVNFDQN
301: SHTSTGRLLN AIVRLSYALH LALVFPIMNY SLRANIDELI FSNKNKPPLA SDTPRFVSLT LTLLALTYLV AVAIPNIWYF FQFLGSTTIV STSFIFPAAI
401: VLRDMHGISK TKDQVMAIVV IVLAVGTSGI AIWTNLNGSG DDQ

Best Arabidopsis Sequence Match ( AT3G56200.1 )
(BLAST)

001: MTPQIKTHLL PKQEPSSSEN HGSSTSGIVF NVSTSIIGAG IMSMPAAFKV LGIVPAFLII TIIAWLSTIS VGFLMKSTLA GESTTYAGVM KESFGKTGSI
101: AVQIATMVAT FGCMIIFSII IGDVLSGNEN GGPEHIGVLQ EWFGSYWWNT RIFALLFVYG FVLLPLVLRR RVERLAISSA VSFLLAVLFV VISSVLAISA
201: LVNGQTKNPR LFPELSNGGS FWQLFTASPV IVTAFTFHFN VHPIGFELKD PLQVIPATKI SVILCAAIYF ATGLFGYLLF GDATMSDILV NFDQSSGSSI
301: GSLLNDIVRL SYVLHLMLVF PLLNFSLRAN LDELLYPKKP SLEKDTKRFI GLTLALLICC FLSAIAVPDI WYFFQFMGST ITVSIAFIFP AAIVLRNIHG
401: VSTSREKIVA AIMLVLAVAT SIIAISTNLY SLAAN

Arabidopsis Description

AVT6CAmino acid transporter AVT6C [Source:UniProtKB/Swiss-Prot;Acc:Q9LYM2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.