Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 5
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23609 | Soybean | cytosol, peroxisome, plasma membrane | 97.85 | 84.54 |
| Bra003570.1-P | Field mustard | cytosol | 77.33 | 70.28 |
| VIT_09s0002g08410.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 82.58 | 70.04 |
| CDX79381 | Canola | plasma membrane | 77.09 | 69.91 |
| PGSC0003DMT400036836 | Potato | plasma membrane | 78.04 | 69.28 |
| CDX67951 | Canola | plasma membrane | 77.33 | 69.08 |
| Solyc03g117350.1.1 | Tomato | plasma membrane | 77.33 | 68.64 |
| CDY39969 | Canola | plasma membrane | 78.52 | 67.98 |
| CDX87318 | Canola | plasma membrane | 78.28 | 67.77 |
| AT1G80510.1 | Thale cress | cytosol, peroxisome, plasma membrane | 79.0 | 67.69 |
| Bra008469.1-P | Field mustard | plasma membrane | 77.8 | 67.63 |
| CDY38675 | Canola | plasma membrane | 77.57 | 67.43 |
| Bra035175.1-P | Field mustard | plasma membrane | 77.8 | 67.36 |
| CDY37600 | Canola | cytosol, peroxisome, plasma membrane | 77.33 | 67.22 |
| GSMUA_Achr1P15770_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 67.54 | 63.17 |
| Os06t0644700-01 | Rice | cytosol, peroxisome, plasma membrane | 69.21 | 60.8 |
| TraesCS7A01G517100.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 70.17 | 60.49 |
| TraesCS7B01G433400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 70.64 | 60.29 |
| EER90107 | Sorghum | cytosol, peroxisome, plastid, vacuole | 69.45 | 60.12 |
| TraesCS7D01G507300.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 69.93 | 59.67 |
| Zm00001d046586_P001 | Maize | plasma membrane | 68.74 | 59.14 |
| GSMUA_Achr3P00900_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 58.23 | 51.8 |
| HORVU7Hr1G115450.1 | Barley | cytosol, peroxisome, plastid | 70.17 | 45.58 |
| KRH15469 | Soybean | plasma membrane | 45.35 | 41.94 |
| KRH54971 | Soybean | plasma membrane | 45.11 | 40.21 |
| KRH45158 | Soybean | plasma membrane | 44.63 | 40.13 |
| KRH01440 | Soybean | plasma membrane | 44.39 | 40.0 |
| KRG93742 | Soybean | plasma membrane | 42.96 | 38.88 |
| KRH14877 | Soybean | plasma membrane | 39.86 | 38.66 |
| KRH18319 | Soybean | plasma membrane | 42.72 | 38.49 |
| KRG93745 | Soybean | plasma membrane | 42.48 | 38.36 |
| KRH73226 | Soybean | endoplasmic reticulum, plasma membrane, plastid, vacuole | 39.62 | 38.25 |
| KRG97662 | Soybean | plastid | 38.66 | 37.16 |
| KRH31212 | Soybean | plastid | 38.42 | 36.93 |
| KRH14885 | Soybean | plasma membrane | 37.71 | 35.67 |
| KRH73229 | Soybean | plasma membrane | 37.23 | 35.37 |
| KRG90323 | Soybean | plasma membrane, vacuole | 14.32 | 20.62 |
Protein Annotations
| EntrezGene:100813328 | MapMan:24.2.3.4.7 | UniProt:A0A0R0G1E9 | InterPro:AA_transpt_TM | EMBL:ACUP02009106 | EnsemblPlantsGene:GLYMA_15G006000 |
| GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlants:KRH09698 | ProteinID:KRH09698 | ProteinID:KRH09698.1 |
| PFAM:PF01490 | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF346 | TMHMM:TMhelix | UniParc:UPI0006ED83B0 | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:+:511403..513556
Molecular Weight (calculated)
45386.8 Da
IEP (calculated)
8.206
GRAVY (calculated)
0.841
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPNHGSGIP GAVFNLTTTV IGAGIMALPA TMKVLGVVLG IVLIIIMGIL SEISVELLVR FSVLCKASSY GEVVQHAMGR PARILSEICI IVNNAGVLVV
101: YLIIIGDVMS GSVHHLGVFD QLMGNGVWDQ RKLVIFVVMV VFLAPLCSLD KIDSLSLTSA ASVALAILFV LVTFTVAFIK LVEGRIDAPR MAPDFSSKTA
201: ILDLLVVIPI MTNAYVCHFN LQPIYNELEQ RSPQKMNRVG RYTTILCILV YSSTAISGYL LFGKDTESDV LTNFDKDLGI RFSSALNYIV RVGYILHLIL
301: VFPVIHFSLR QTVDALVFEG SPPLSESRKR SLGLTVVLLV LIYIGSTMIP SIWTAFKFTG ATTAVSLGFI FPSLVALRLS HQGDLSYGER ILSWLMLVLA
401: VTVSIVGVVG NIYSLESKS
101: YLIIIGDVMS GSVHHLGVFD QLMGNGVWDQ RKLVIFVVMV VFLAPLCSLD KIDSLSLTSA ASVALAILFV LVTFTVAFIK LVEGRIDAPR MAPDFSSKTA
201: ILDLLVVIPI MTNAYVCHFN LQPIYNELEQ RSPQKMNRVG RYTTILCILV YSSTAISGYL LFGKDTESDV LTNFDKDLGI RFSSALNYIV RVGYILHLIL
301: VFPVIHFSLR QTVDALVFEG SPPLSESRKR SLGLTVVLLV LIYIGSTMIP SIWTAFKFTG ATTAVSLGFI FPSLVALRLS HQGDLSYGER ILSWLMLVLA
401: VTVSIVGVVG NIYSLESKS
001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
Arabidopsis Description
AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.