Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- peroxisome 1
- plasma membrane 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09698 | Soybean | plasma membrane | 63.17 | 67.54 |
| Os06t0644700-01 | Rice | cytosol, peroxisome, plasma membrane | 69.64 | 65.41 |
| Solyc03g117350.1.1 | Tomato | plasma membrane | 66.07 | 62.71 |
| TraesCS7A01G517100.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 67.86 | 62.55 |
| EER90107 | Sorghum | cytosol, peroxisome, plastid, vacuole | 67.41 | 62.4 |
| VIT_09s0002g08410.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 68.75 | 62.35 |
| TraesCS7D01G507300.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 68.3 | 62.32 |
| PGSC0003DMT400036836 | Potato | plasma membrane | 65.62 | 62.29 |
| TraesCS7B01G433400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 68.08 | 62.12 |
| Zm00001d046586_P001 | Maize | plasma membrane | 66.74 | 61.4 |
| GSMUA_Achr3P00900_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 64.51 | 61.36 |
| KRH23609 | Soybean | cytosol, peroxisome, plasma membrane | 65.62 | 60.62 |
| Bra003570.1-P | Field mustard | cytosol | 62.28 | 60.52 |
| CDX67951 | Canola | plasma membrane | 63.17 | 60.34 |
| CDX79381 | Canola | plasma membrane | 62.05 | 60.17 |
| CDY38675 | Canola | plasma membrane | 64.29 | 59.75 |
| CDY37600 | Canola | cytosol, peroxisome, plasma membrane | 64.29 | 59.75 |
| Bra008469.1-P | Field mustard | plasma membrane | 64.29 | 59.75 |
| CDY39969 | Canola | plasma membrane | 63.62 | 58.88 |
| AT1G80510.1 | Thale cress | cytosol, peroxisome, plasma membrane | 64.06 | 58.69 |
| CDX87318 | Canola | plasma membrane | 63.39 | 58.68 |
| Bra035175.1-P | Field mustard | plasma membrane | 62.95 | 58.26 |
| HORVU7Hr1G115450.1 | Barley | cytosol, peroxisome, plastid | 67.86 | 47.13 |
| GSMUA_Achr7P20080_001 | Banana | extracellular, plasma membrane, vacuole | 36.16 | 40.4 |
| GSMUA_Achr8P24480_001 | Banana | cytosol, golgi, plasma membrane | 39.96 | 38.66 |
| GSMUA_Achr7P22240_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 38.62 | 38.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P15770_001 | EnsemblPlants:GSMUA_Achr1T15770_001 | EnsemblPlantsGene:GSMUA_Achr1G15770_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF346 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002959750 | UniProt:M0S085 | MapMan:24.2.3.4.7 | : | : | : |
Description
Putative Probable sodium-coupled neutral amino acid transporter 6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G15770_001]
Coordinates
chr1:+:11826849..11828264
Molecular Weight (calculated)
47981.6 Da
IEP (calculated)
6.516
GRAVY (calculated)
0.720
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSTYSAVPV TASIELQANS PVPPQVPPKK EFLEEEFDDD LPLILDADGA GYGPSASGSG VPGAVFNLAT SIIGAGIMAL PAAMKVLGIL LGFVSIVLMG
101: ILSEISIELL IRFAVLCKST SYGDVVESAL GRPFKIVSEI CVIVNNAGVL VVYLIIIGDV MSGSAKHVGV FDQLLGHGEW DHRKLVIFVV LVIFLAPLCA
201: LEKIDSLSLT SAASVALAVV FVVVSCIIAS VKLAEGRTRT PRMGPNFGSK AAILDLLVVV PIMTNAYVCH FNVQPIYNEL KERTPKKMYL VSRITTVLSV
301: AIYASTSISG YLLFGEDTES DVLTNFDKDL GIPFSSILNY TVDSLVFAGS APASRKRMLA LTAILLCVIY FGSTMIPNIW VAFKFTGATT GMSLGFIFPA
401: LIALRLDKQK KILKLQERYI AWVMLVLAVV ASILGVVGNI YTLKNMSE
101: ILSEISIELL IRFAVLCKST SYGDVVESAL GRPFKIVSEI CVIVNNAGVL VVYLIIIGDV MSGSAKHVGV FDQLLGHGEW DHRKLVIFVV LVIFLAPLCA
201: LEKIDSLSLT SAASVALAVV FVVVSCIIAS VKLAEGRTRT PRMGPNFGSK AAILDLLVVV PIMTNAYVCH FNVQPIYNEL KERTPKKMYL VSRITTVLSV
301: AIYASTSISG YLLFGEDTES DVLTNFDKDL GIPFSSILNY TVDSLVFAGS APASRKRMLA LTAILLCVIY FGSTMIPNIW VAFKFTGATT GMSLGFIFPA
401: LIALRLDKQK KILKLQERYI AWVMLVLAVV ASILGVVGNI YTLKNMSE
001: MDSSYSVISK TSYVELQKPT VNGKPRNKLL PSDEESFVND FDDARNGVGG EDADDLDFDV ADYPLVHGKS SNQGSGIYGA VFNLTTSIIG AGIMALPATM
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
101: KVLGLVLGFV LIILMALLSE ISVELLVRFS VLYKSKSYGE VVQFALGKTA RVLSEICIIV NNGGVLVVYL IIMGDVMSGS LHHIGVLDQW LGNGFWDHRK
201: VLILIVMVIF LAPLCALNKI DSLSVTSAAS VALAVVFVVV CFVVATIKLI EGTIDPPRLS PDFGSKQAIL DLLVVIPIMS NAYVCHFNVQ PIYNELEGRS
301: PHKMNRVGRI TTAICVVVYA STAVSGYLLF GKDTESDILT NFDQDLGIRF SSAVNYIVRI GYILHLVLVF PVIHFSLRET VNTLLFEGSP PLSESKKRSL
401: GLTVVLLALI YIGSTMIPNI WTAFKFTGAT SAVSLGFTFP ALIALRLGKQ SNSLSFVERS VSWLMLILAV VVSIVGTIGN IYSLESKSD
Arabidopsis Description
AVT6EAmino acid transporter AVT6E [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.