Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0012g00910.t01 | Wine grape | cytosol, extracellular | 59.15 | 9.59 |
| VIT_00s0225g00220.t01 | Wine grape | cytosol | 36.62 | 6.07 |
| VIT_18s0001g13000.t01 | Wine grape | cytosol | 30.99 | 4.43 |
| VIT_14s0060g00840.t01 | Wine grape | cytosol | 25.35 | 4.34 |
| HORVU1Hr1G014710.1 | Barley | endoplasmic reticulum, plasma membrane | 1.41 | 2.78 |
| HORVU2Hr1G030200.1 | Barley | endoplasmic reticulum, plasma membrane | 1.41 | 2.78 |
| HORVU6Hr1G043980.1 | Barley | endoplasmic reticulum, plasma membrane | 1.41 | 2.78 |
| TraesCS2A01G165000.1 | Wheat | endoplasmic reticulum, plasma membrane | 1.41 | 2.78 |
| TraesCS2B01G191000.1 | Wheat | endoplasmic reticulum, plasma membrane | 1.41 | 2.78 |
| TraesCS2D01G171900.1 | Wheat | endoplasmic reticulum, plasma membrane | 1.41 | 2.78 |
Protein Annotations
| ArrayExpress:VIT_19s0015g02330 | EMBL:FN596747 | EnsemblPlants:VIT_19s0015g02330.t01 | EnsemblPlantsGene:VIT_19s0015g02330 | Gene3D:3.30.450.60 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016192 | InterPro:Longin-like_dom_sf | PANTHER:PTHR10529 | PANTHER:PTHR10529:SF278 | ProteinID:CBI39907 |
| ProteinID:CBI39907.3 | SUPFAM:SSF64356 | UniParc:UPI0001BE54F7 | UniProt:D7UAZ2 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr19:-:12136405..12137703
Molecular Weight (calculated)
8371.3 Da
IEP (calculated)
5.718
GRAVY (calculated)
0.158
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MYNIYLYTLI NLFMPFECIK CKQKNMAHAV ALFKSYFGGA FKEDAIRNNF VLIYELLDEI MDFGYPQNLS P
001: MPVAASAIYF LNLRGDVLIN RTYRDDVGGN MVDAFRTHIM QTKELGNCPV RQIGGCSFVY MRISNVYIVI VVSSNANVAC GFKFVVEAVA LFKSYFGGAF
101: DEDAIRNNFV LIYELLDEIM DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLAYKKNEV FLDIVESVNL LMSSKGNVLR
201: CDVTGKVLMK CFLSGMPDLK LGLNDKIGLE KESEMKSRPA KSGKTIELDD VTFHQCVNLT RFNSEKTVSF VPPDGEFELM KYRITEGVNL PFRVLPTIKE
301: LGRTRMEVNV KVKSVFGAKM FALGVVVKIP VPKQTAKTNF QVTTGRAKYN PSIDCLVWKI RKFPGQTEST LSAEIELIST MGEKKSWTRP PIQMEFQVPM
401: FTASGLRVRF LKVWEKSGYN TVEWVRYITK AGSYEIRC
101: DEDAIRNNFV LIYELLDEIM DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLAYKKNEV FLDIVESVNL LMSSKGNVLR
201: CDVTGKVLMK CFLSGMPDLK LGLNDKIGLE KESEMKSRPA KSGKTIELDD VTFHQCVNLT RFNSEKTVSF VPPDGEFELM KYRITEGVNL PFRVLPTIKE
301: LGRTRMEVNV KVKSVFGAKM FALGVVVKIP VPKQTAKTNF QVTTGRAKYN PSIDCLVWKI RKFPGQTEST LSAEIELIST MGEKKSWTRP PIQMEFQVPM
401: FTASGLRVRF LKVWEKSGYN TVEWVRYITK AGSYEIRC
Arabidopsis Description
Clathrin adaptor complexes medium subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4KHJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.