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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 4
  • nucleus 1
  • mitochondrion 2
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_00s0225g00220.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60780.1 VIT_00s0225g00220.t01 AT1G60780.1 23543752
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P17600_001 Banana cytosol 93.93 93.93
Zm00001d043726_P001 Maize cytosol 93.93 93.71
Os01t0703600-01 Rice plasma membrane 93.93 93.71
EES01338 Sorghum cytosol 93.93 93.71
Zm00001d011676_P001 Maize extracellular, plasma membrane 93.69 93.47
Solyc05g013340.2.1 Tomato plastid 92.76 93.19
GSMUA_Achr2P06510_001 Banana cytosol, endoplasmic reticulum 92.99 92.99
HORVU3Hr1G066020.1 Barley cytosol 92.76 92.54
TraesCS3D01G255100.2 Wheat cytosol 92.76 92.54
TraesCS3A01G254200.2 Wheat cytosol 92.52 92.31
TraesCS3B01G286200.2 Wheat cytosol 92.29 92.07
KRH45615 Soybean cytosol 92.06 92.06
KRG99414 Soybean cytosol 92.06 92.06
GSMUA_Achr1P25430_001 Banana cytosol, extracellular 91.36 91.36
KRH74545 Soybean endoplasmic reticulum 91.12 91.12
KRH69617 Soybean cytosol 91.12 91.12
PGSC0003DMT400002906 Potato mitochondrion 46.73 90.91
Os05t0543100-01 Rice plasma membrane 90.89 90.47
CDY19316 Canola cytosol 90.42 90.42
CDX97909 Canola cytosol 90.42 90.42
Bra031481.1-P Field mustard cytosol 90.19 90.19
Bra019904.1-P Field mustard cytosol 90.19 90.19
AT1G60780.1 Thale cress cytosol 89.95 89.95
CDY63681 Canola cytosol 89.95 89.95
CDY61312 Canola cytosol 89.95 89.95
CDY54239 Canola cytosol 89.95 89.95
Bra031752.1-P Field mustard cytosol 89.02 89.86
CDY46183 Canola cytosol 89.72 89.72
HORVU1Hr1G079050.3 Barley cytosol 89.72 89.51
TraesCS1A01G365600.1 Wheat golgi 89.72 89.51
TraesCS1B01G383200.1 Wheat cytosol 89.72 89.51
CDY63680 Canola cytosol 89.25 88.22
Solyc04g026360.2.1 Tomato nucleus 46.03 86.78
Zm00001d052338_P001 Maize cytosol 11.92 86.44
Solyc04g026380.2.1 Tomato cytosol 47.2 85.96
AT1G10730.1 Thale cress cytosol 85.75 85.75
TraesCS1D01G371000.1 Wheat cytosol 88.55 83.11
Zm00001d036168_P001 Maize mitochondrion 38.78 68.31
GSMUA_Achr8P31910_001 Banana cytosol 18.93 50.31
VIT_02s0012g00910.t01 Wine grape cytosol, extracellular 39.72 38.81
VIT_19s0015g02330.t01 Wine grape extracellular 6.07 36.62
VIT_14s0060g00840.t01 Wine grape cytosol 25.7 26.51
VIT_18s0001g13000.t01 Wine grape cytosol 29.44 25.35
Protein Annotations
EntrezGene:100251026wikigene:100251026Gene3D:2.60.40.1170MapMan:22.1.2.3Gene3D:3.30.450.60InterPro:AP2_Mu_C_sf
InterPro:AP_mu_sigma_suProteinID:CBI23375ProteinID:CBI23375.3InterPro:Clathrin_muInterPro:Clathrin_mu_CSUniProt:D7SYS4
EMBL:FN595256GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810
GO:GO:0006886GO:GO:0008150GO:GO:0015031GO:GO:0016020GO:GO:0016192GO:GO:0030131
InterPro:IPR028565EntrezGene:LOC100251026wikigene:LOC100251026InterPro:Longin-like_dom_sfInterPro:MHDPFAM:PF00928
PFAM:PF01217PIRSF:PIRSF005992PRINTS:PR00314ScanProsite:PS00990ScanProsite:PS00991PFscan:PS51072
PANTHER:PTHR10529PANTHER:PTHR10529:SF338SUPFAM:SSF49447SUPFAM:SSF64356TIGR:TC51737TIGR:TC70729
UniParc:UPI00015CD85DArrayExpress:VIT_00s0225g00220EnsemblPlantsGene:VIT_00s0225g00220EnsemblPlants:VIT_00s0225g00220.t01unigene:Vvi.10330RefSeq:XP_002274463
RefSeq:XP_002274463.1:::::
Description
No Description!
Coordinates
chrUn:+:14737670..14743845
Molecular Weight (calculated)
49017.0 Da
IEP (calculated)
6.292
GRAVY (calculated)
-0.246
Length
428 amino acids
Sequence
(BLAST)
001: MAGAASALFL LDIKGRVLVW RDYRGDVSAV QAERFFAKLM EKEGDPESQD PVVYDNGVTY MFIQHNNVFL MTASRQNCNA ASHLLFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE AKILSEFIKT DAYRMEVSQR PPMAVTNAVS WRSEGIRYKK NEVFLDVVES VNILVNSNGQ IIRSDVVGAL
201: KMRTYLSGMP ECKLGLNDRV LLEAQGRSTK GKAIDLDDIK FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLI WVEAQVERHS RSRIEIMVKA
301: RSQFKERSTA TNVEIELPVP SDATNPNIRT SMGSAAYAPE NDALLWKIKS FPGGKEYMLR AEFSLPSITA EEGAPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLI
Best Arabidopsis Sequence Match ( AT1G60780.1 )
(BLAST)
001: MAGAASALFL LDIKGRVLVW RDYRGDVSAA QAERFFTKLI EKEGDSQSND PVAYDNGVTY MFVQHSNVYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGIQYKK NEVFLDVIEN VNILVNSNGQ IVRSDVVGAL
201: KMRTYLTGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGAFDLMTY RLSTQVKPLI WVEAQIESHS RSRVEMLIKA
301: RSQFKERSTA TNVEIELPVP TDASNPTVRT SLGSASYAPE KDALVWKIKS FPGNKEYMLR AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLV
Arabidopsis Description
AP1M2AP-1 complex subunit mu-2 [Source:UniProtKB/Swiss-Prot;Acc:O22715]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.