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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG99414
KRH45615
KRH69617
KRH74545

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60780.1 KRG99414 AT1G60780.1 23543752
AT1G60780.1 KRH45615 AT1G60780.1 23543752
AT1G60780.1 KRH69617 AT1G60780.1 23543752
AT1G60780.1 KRH74545 AT1G60780.1 23543752
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH45615 Soybean cytosol 99.77 99.77
KRH74545 Soybean endoplasmic reticulum 96.03 96.03
KRH69617 Soybean cytosol 95.79 95.79
VIT_00s0225g00220.t01 Wine grape cytosol 92.06 92.06
Solyc05g013340.2.1 Tomato plastid 90.89 91.31
PGSC0003DMT400002906 Potato mitochondrion 46.5 90.45
AT1G60780.1 Thale cress cytosol 90.19 90.19
GSMUA_Achr7P17600_001 Banana cytosol 90.19 90.19
Bra031481.1-P Field mustard cytosol 90.19 90.19
CDY63681 Canola cytosol 89.95 89.95
CDY19316 Canola cytosol 89.95 89.95
CDY61312 Canola cytosol 89.72 89.72
CDX97909 Canola cytosol 89.72 89.72
CDY54239 Canola cytosol 89.72 89.72
Bra031752.1-P Field mustard cytosol 88.78 89.62
CDY46183 Canola cytosol 89.49 89.49
Bra019904.1-P Field mustard cytosol 89.49 89.49
GSMUA_Achr1P25430_001 Banana cytosol, extracellular 89.49 89.49
GSMUA_Achr2P06510_001 Banana cytosol, endoplasmic reticulum 89.02 89.02
Zm00001d043726_P001 Maize cytosol 88.78 88.58
EES01338 Sorghum cytosol 88.78 88.58
HORVU3Hr1G066020.1 Barley cytosol 88.55 88.34
Zm00001d011676_P001 Maize extracellular, plasma membrane 88.55 88.34
Os01t0703600-01 Rice plasma membrane 88.55 88.34
TraesCS3D01G255100.2 Wheat cytosol 88.32 88.11
CDY63680 Canola cytosol 89.02 87.99
TraesCS3A01G254200.2 Wheat cytosol 88.08 87.88
TraesCS3B01G286200.2 Wheat cytosol 87.85 87.65
TraesCS1B01G383200.1 Wheat cytosol 87.38 87.18
TraesCS1A01G365600.1 Wheat golgi 87.38 87.18
HORVU1Hr1G079050.3 Barley cytosol 87.38 87.18
Os05t0543100-01 Rice plasma membrane 86.92 86.51
AT1G10730.1 Thale cress cytosol 85.75 85.75
Solyc04g026380.2.1 Tomato cytosol 46.96 85.53
Solyc04g026360.2.1 Tomato nucleus 44.16 83.26
Zm00001d052338_P001 Maize cytosol 11.21 81.36
TraesCS1D01G371000.1 Wheat cytosol 86.22 80.92
Zm00001d036168_P001 Maize mitochondrion 35.98 63.37
GSMUA_Achr8P31910_001 Banana cytosol 16.82 44.72
KRH58201 Soybean mitochondrion 41.36 40.41
KRH04335 Soybean endoplasmic reticulum 41.12 40.18
KRH77207 Soybean cytosol, extracellular 40.65 39.73
KRH28283 Soybean cytosol, golgi 40.42 39.5
KRH16840 Soybean cytosol 32.94 31.19
KRH72454 Soybean cytosol 28.74 30.52
KRH61131 Soybean cytosol, nucleus 30.37 29.35
KRH51806 Soybean cytosol 25.47 28.31
KRH33789 Soybean cytosol 24.53 25.3
KRG96704 Soybean cytosol 24.53 25.3
KRH68423 Soybean cytosol 24.07 23.57
Protein Annotations
EntrezGene:100789477Gene3D:2.60.40.1170MapMan:22.1.2.3Gene3D:3.30.450.60EMBL:ACUP02011051InterPro:AP2_Mu_C_sf
InterPro:AP_mu_sigma_suInterPro:Clathrin_muInterPro:Clathrin_mu_CSEnsemblPlantsGene:GLYMA_18G143100GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0015031
GO:GO:0016020GO:GO:0016192GO:GO:0030131UniProt:I1N1K1InterPro:IPR028565EnsemblPlants:KRG99414
ProteinID:KRG99414ProteinID:KRG99414.1InterPro:Longin-like_dom_sfInterPro:MHDPFAM:PF00928PFAM:PF01217
PIRSF:PIRSF005992PRINTS:PR00314ScanProsite:PS00990ScanProsite:PS00991PFscan:PS51072PANTHER:PTHR10529
PANTHER:PTHR10529:SF338SUPFAM:SSF49447SUPFAM:SSF64356UniParc:UPI000233E9BD::
Description
hypothetical protein
Coordinates
chr18:-:22710838..22716473
Molecular Weight (calculated)
49191.3 Da
IEP (calculated)
6.119
GRAVY (calculated)
-0.219
Length
428 amino acids
Sequence
(BLAST)
001: MAGAASALFL LDIKGRVLIW RDYRGDVTAV EAERFFTKLI EKEGDPQSQD PVVYDNGVTY LFIQHSNVFL MMATRQNCNA ASLLFFLHRI VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEI MDFGYPQYTE AKILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGINYKK NEVFLDVVES VNILVNSNGQ IIRSDVVGAL
201: KMRTYLSGMP ECKLGLNDRV LLEAQGRTTK GKSIDLEDIK FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLV WVEAQVEKHS KSRIEIMVKA
301: RSQFKERSTA TNVEIELPVP ADATNPNVRT SMGSASYAPE KDALIWKIRS FPGGKEYMLR AEFRLPSIVD EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLI
Best Arabidopsis Sequence Match ( AT1G60780.1 )
(BLAST)
001: MAGAASALFL LDIKGRVLVW RDYRGDVSAA QAERFFTKLI EKEGDSQSND PVAYDNGVTY MFVQHSNVYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGIQYKK NEVFLDVIEN VNILVNSNGQ IVRSDVVGAL
201: KMRTYLTGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGAFDLMTY RLSTQVKPLI WVEAQIESHS RSRVEMLIKA
301: RSQFKERSTA TNVEIELPVP TDASNPTVRT SLGSASYAPE KDALVWKIKS FPGNKEYMLR AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLV
Arabidopsis Description
AP1M2AP-1 complex subunit mu-2 [Source:UniProtKB/Swiss-Prot;Acc:O22715]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.