Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031752.1-P | Field mustard | cytosol | 92.99 | 93.87 |
| CDY61312 | Canola | cytosol | 93.46 | 93.46 |
| CDY54239 | Canola | cytosol | 92.99 | 92.99 |
| CDY19316 | Canola | cytosol | 92.29 | 92.29 |
| CDX97909 | Canola | cytosol | 92.06 | 92.06 |
| Bra019904.1-P | Field mustard | cytosol | 91.82 | 91.82 |
| AT1G60780.1 | Thale cress | cytosol | 91.59 | 91.59 |
| Solyc05g013340.2.1 | Tomato | plastid | 86.45 | 86.85 |
| KRH45615 | Soybean | cytosol | 85.98 | 85.98 |
| KRH69617 | Soybean | cytosol | 85.75 | 85.75 |
| VIT_00s0225g00220.t01 | Wine grape | cytosol | 85.75 | 85.75 |
| KRG99414 | Soybean | cytosol | 85.75 | 85.75 |
| KRH74545 | Soybean | endoplasmic reticulum | 85.51 | 85.51 |
| Zm00001d043726_P001 | Maize | cytosol | 84.35 | 84.15 |
| Os01t0703600-01 | Rice | plasma membrane | 84.35 | 84.15 |
| EES01338 | Sorghum | cytosol | 84.35 | 84.15 |
| PGSC0003DMT400002906 | Potato | mitochondrion | 43.22 | 84.09 |
| Zm00001d011676_P001 | Maize | extracellular, plasma membrane | 84.11 | 83.92 |
| GSMUA_Achr7P17600_001 | Banana | cytosol | 83.64 | 83.64 |
| GSMUA_Achr2P06510_001 | Banana | cytosol, endoplasmic reticulum | 83.64 | 83.64 |
| HORVU3Hr1G066020.1 | Barley | cytosol | 83.64 | 83.45 |
| TraesCS3B01G286200.2 | Wheat | cytosol | 83.41 | 83.22 |
| TraesCS3A01G254200.2 | Wheat | cytosol | 83.41 | 83.22 |
| TraesCS3D01G255100.2 | Wheat | cytosol | 83.18 | 82.98 |
| GSMUA_Achr1P25430_001 | Banana | cytosol, extracellular | 82.24 | 82.24 |
| Solyc04g026360.2.1 | Tomato | nucleus | 43.22 | 81.5 |
| HORVU1Hr1G079050.3 | Barley | cytosol | 81.31 | 81.12 |
| TraesCS1A01G365600.1 | Wheat | golgi | 81.31 | 81.12 |
| TraesCS1B01G383200.1 | Wheat | cytosol | 81.31 | 81.12 |
| Os05t0543100-01 | Rice | plasma membrane | 81.07 | 80.7 |
| Solyc04g026380.2.1 | Tomato | cytosol | 43.69 | 79.57 |
| Zm00001d052338_P001 | Maize | cytosol | 10.75 | 77.97 |
| TraesCS1D01G371000.1 | Wheat | cytosol | 80.14 | 75.22 |
| Zm00001d036168_P001 | Maize | mitochondrion | 33.18 | 58.44 |
| GSMUA_Achr8P31910_001 | Banana | cytosol | 15.89 | 42.24 |
| AT5G46630.2 | Thale cress | cytosol | 39.02 | 37.87 |
| AT4G24550.2 | Thale cress | cytosol | 32.48 | 30.82 |
| AT1G56590.1 | Thale cress | cytosol | 25.93 | 26.75 |
Protein Annotations
| Gene3D:2.60.40.1170 | MapMan:22.1.2.3 | Gene3D:3.30.450.60 | EntrezGene:837616 | ProteinID:AAD31340.1 | ProteinID:AAF17661.1 |
| ProteinID:AEE28635.1 | InterPro:AP2_Mu_C_sf | InterPro:AP_mu_sigma_su | ArrayExpress:AT1G10730 | EnsemblPlantsGene:AT1G10730 | RefSeq:AT1G10730 |
| TAIR:AT1G10730 | RefSeq:AT1G10730-TAIR-G | EnsemblPlants:AT1G10730.1 | TAIR:AT1G10730.1 | InterPro:Clathrin_mu | InterPro:Clathrin_mu_CS |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030131 |
| GO:GO:0030665 | GO:GO:0031410 | InterPro:IPR028565 | InterPro:Longin-like_dom_sf | InterPro:MHD | RefSeq:NP_172543.1 |
| PFAM:PF00928 | PFAM:PF01217 | PIRSF:PIRSF005992 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00314 | ScanProsite:PS00991 | PFscan:PS51072 | PANTHER:PTHR10529 | PANTHER:PTHR10529:SF338 | UniProt:Q9SAC9 |
| SUPFAM:SSF49447 | SUPFAM:SSF64356 | UniParc:UPI00000A5F15 | : | : | : |
Description
AP1M1AP-1 complex subunit mu-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAC9]
Coordinates
chr1:+:3565257..3568106
Molecular Weight (calculated)
49227.2 Da
IEP (calculated)
6.615
GRAVY (calculated)
-0.220
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAASALFL LDIKGRVLVW RDYRGDVTAA QAERFFTKLI ETEGDSQSND PVAYDNGVTY MFVQHSNIYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQFTE ARILSEFIKT DAYRMEVTQR PPMAVTNSVS WRSEGLKFKK NEVFLDVIES VNILVNSNGQ IVRSDVVGAL
201: KMRTYLSGMP ECKLGLNDRI LLEAQGRAIK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLI WVEAHIERHS RSRVEMLVKA
301: RSQFKDRSYA TSVEIELPVP TDAYNPDVRT SLGSAAYAPE KDALVWKIQY FYGNKEHTLK ADFHLPSIAA EEATPERKAP IRVKFEIPKF IVSGIQVRYL
401: KIIEKSGYQA HPWVRYITMA GEYELRLM
101: LEEESLRDNF VVVYELLDEM MDFGYPQFTE ARILSEFIKT DAYRMEVTQR PPMAVTNSVS WRSEGLKFKK NEVFLDVIES VNILVNSNGQ IVRSDVVGAL
201: KMRTYLSGMP ECKLGLNDRI LLEAQGRAIK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLI WVEAHIERHS RSRVEMLVKA
301: RSQFKDRSYA TSVEIELPVP TDAYNPDVRT SLGSAAYAPE KDALVWKIQY FYGNKEHTLK ADFHLPSIAA EEATPERKAP IRVKFEIPKF IVSGIQVRYL
401: KIIEKSGYQA HPWVRYITMA GEYELRLM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.