Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027924.1-P | Field mustard | cytosol | 94.22 | 95.13 |
| CDX95277 | Canola | cytosol | 92.77 | 88.51 |
| CDY41703 | Canola | cytosol | 92.77 | 85.37 |
| Solyc01g100820.2.1 | Tomato | cytosol | 80.0 | 80.0 |
| KRG96704 | Soybean | cytosol | 79.52 | 79.52 |
| PGSC0003DMT400007122 | Potato | cytosol | 76.39 | 79.05 |
| KRH33789 | Soybean | cytosol | 79.04 | 79.04 |
| VIT_14s0060g00840.t01 | Wine grape | cytosol | 77.83 | 77.83 |
| KRH68423 | Soybean | cytosol | 80.48 | 76.43 |
| GSMUA_Achr5P21080_001 | Banana | cytosol | 76.39 | 76.2 |
| EES06180 | Sorghum | cytosol | 69.88 | 69.54 |
| Os05t0383100-01 | Rice | cytosol | 67.95 | 67.63 |
| TraesCS1D01G240100.2 | Wheat | cytosol | 67.23 | 66.91 |
| HORVU1Hr1G057140.1 | Barley | cytosol | 66.99 | 66.67 |
| TraesCS1B01G252100.2 | Wheat | cytosol | 66.99 | 66.67 |
| TraesCS1A01G240000.1 | Wheat | cytosol | 66.99 | 66.67 |
| Zm00001d044264_P001 | Maize | cytosol | 46.75 | 64.88 |
| Zm00001d054005_P006 | Maize | cytosol | 67.47 | 64.37 |
| Zm00001d006386_P001 | Maize | cytosol, plastid | 37.83 | 53.77 |
| Zm00001d002305_P001 | Maize | mitochondrion | 46.27 | 44.86 |
| Zm00001d049311_P001 | Maize | cytosol | 22.17 | 40.71 |
| Zm00001d021311_P001 | Maize | plastid | 19.76 | 35.34 |
| Zm00001d032192_P001 | Maize | extracellular, golgi | 28.19 | 26.9 |
| AT1G60780.1 | Thale cress | cytosol | 26.99 | 26.17 |
| AT1G10730.1 | Thale cress | cytosol | 26.75 | 25.93 |
| AT4G24550.2 | Thale cress | cytosol | 26.51 | 24.39 |
| AT5G46630.2 | Thale cress | cytosol | 22.41 | 21.09 |
Protein Annotations
| Gene3D:2.60.40.1170 | MapMan:22.1.5.3 | Gene3D:3.30.450.60 | EntrezGene:842113 | ProteinID:AAG09104.1 | ProteinID:AEE33412.1 |
| InterPro:AP2_Mu_C_sf | ArrayExpress:AT1G56590 | EnsemblPlantsGene:AT1G56590 | RefSeq:AT1G56590 | TAIR:AT1G56590 | RefSeq:AT1G56590-TAIR-G |
| EnsemblPlants:AT1G56590.1 | TAIR:AT1G56590.1 | EMBL:BT015502 | EMBL:BX814222 | InterPro:Clathrin_mu | InterPro:Clathrin_mu_CS |
| UniProt:F4I562 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 |
| GO:GO:0009630 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030131 | GO:GO:0030659 |
| GO:GO:0031410 | InterPro:IPR028565 | InterPro:Longin-like_dom_sf | InterPro:MHD | RefSeq:NP_176052.3 | PFAM:PF00928 |
| PIRSF:PIRSF005992 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00314 | ScanProsite:PS00990 |
| PFscan:PS51072 | PANTHER:PTHR43967 | PANTHER:PTHR43967:SF2 | SUPFAM:SSF49447 | SUPFAM:SSF64356 | UniParc:UPI000034F4B5 |
| Symbol:ZIP4 | : | : | : | : | : |
Description
AP3MAP-3 complex subunit mu [Source:UniProtKB/Swiss-Prot;Acc:F4I562]
Coordinates
chr1:-:21201948..21204856
Molecular Weight (calculated)
46315.2 Da
IEP (calculated)
5.290
GRAVY (calculated)
0.006
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQCIFLISD SGEVMLEKQL TGHRVDRSIC AWFWDQYISQ GDSFKALPVI ASPTHYLFQI VRDGITFLAC SQVEMPPLMA IEFLCRVADV LSEYLGGLNE
101: DLIKDNFIIV YELLDEMIDN GFPLTTEPSI LKEMIAPPNL VSKMLSVVTG NASNVSDTLP SGAGSCVPWR PTDPKYSSNE VYVDLVEEMD AIVNRDGELV
201: KCEIYGEVQM NSQLTGFPDL TLSFANPSIL EDMRFHPCVR YRPWESHQVL SFVPPDGEFK LMSYRVKKLK NTPVYVKPQI TSDSGTCRIS VLVGIRSDPG
301: KTIESITLSF QLPHCVSSAD LSSNHGTVTI LSNKTCTWTI GRIPKDKTPC LSGTLALEPG LERLHVFPTF KLGFKIMGIA LSGLRIEKLD LQTIPPRLYK
401: GFRAQTRAGE FDVRL
101: DLIKDNFIIV YELLDEMIDN GFPLTTEPSI LKEMIAPPNL VSKMLSVVTG NASNVSDTLP SGAGSCVPWR PTDPKYSSNE VYVDLVEEMD AIVNRDGELV
201: KCEIYGEVQM NSQLTGFPDL TLSFANPSIL EDMRFHPCVR YRPWESHQVL SFVPPDGEFK LMSYRVKKLK NTPVYVKPQI TSDSGTCRIS VLVGIRSDPG
301: KTIESITLSF QLPHCVSSAD LSSNHGTVTI LSNKTCTWTI GRIPKDKTPC LSGTLALEPG LERLHVFPTF KLGFKIMGIA LSGLRIEKLD LQTIPPRLYK
401: GFRAQTRAGE FDVRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.