Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031481.1-P | Field mustard | cytosol | 97.43 | 97.43 |
| CDY46183 | Canola | cytosol | 97.2 | 97.2 |
| CDY63681 | Canola | cytosol | 97.2 | 97.2 |
| CDY63680 | Canola | cytosol | 96.03 | 94.92 |
| AT1G10730.1 | Thale cress | cytosol | 91.59 | 91.59 |
| Solyc05g013340.2.1 | Tomato | plastid | 90.89 | 91.31 |
| KRH69617 | Soybean | cytosol | 90.65 | 90.65 |
| KRH74545 | Soybean | endoplasmic reticulum | 90.42 | 90.42 |
| KRH45615 | Soybean | cytosol | 90.42 | 90.42 |
| KRG99414 | Soybean | cytosol | 90.19 | 90.19 |
| PGSC0003DMT400002906 | Potato | mitochondrion | 46.26 | 90.0 |
| VIT_00s0225g00220.t01 | Wine grape | cytosol | 89.95 | 89.95 |
| EES01338 | Sorghum | cytosol | 88.78 | 88.58 |
| Os01t0703600-01 | Rice | plasma membrane | 88.78 | 88.58 |
| Zm00001d043726_P001 | Maize | cytosol | 88.78 | 88.58 |
| Zm00001d011676_P001 | Maize | extracellular, plasma membrane | 88.55 | 88.34 |
| GSMUA_Achr7P17600_001 | Banana | cytosol | 88.08 | 88.08 |
| HORVU3Hr1G066020.1 | Barley | cytosol | 88.08 | 87.88 |
| GSMUA_Achr2P06510_001 | Banana | cytosol, endoplasmic reticulum | 87.62 | 87.62 |
| TraesCS3D01G255100.2 | Wheat | cytosol | 87.38 | 87.18 |
| TraesCS3B01G286200.2 | Wheat | cytosol | 87.15 | 86.95 |
| TraesCS3A01G254200.2 | Wheat | cytosol | 87.15 | 86.95 |
| GSMUA_Achr1P25430_001 | Banana | cytosol, extracellular | 86.68 | 86.68 |
| TraesCS1A01G365600.1 | Wheat | golgi | 86.22 | 86.01 |
| TraesCS1B01G383200.1 | Wheat | cytosol | 86.22 | 86.01 |
| HORVU1Hr1G079050.3 | Barley | cytosol | 86.22 | 86.01 |
| Os05t0543100-01 | Rice | plasma membrane | 85.98 | 85.58 |
| Solyc04g026380.2.1 | Tomato | cytosol | 46.5 | 84.68 |
| Solyc04g026360.2.1 | Tomato | nucleus | 44.86 | 84.58 |
| Zm00001d052338_P001 | Maize | cytosol | 11.21 | 81.36 |
| TraesCS1D01G371000.1 | Wheat | cytosol | 85.05 | 79.82 |
| Zm00001d036168_P001 | Maize | mitochondrion | 35.98 | 63.37 |
| GSMUA_Achr8P31910_001 | Banana | cytosol | 17.06 | 45.34 |
| AT5G46630.2 | Thale cress | cytosol | 38.55 | 37.41 |
| AT4G24550.2 | Thale cress | cytosol | 32.48 | 30.82 |
| AT1G56590.1 | Thale cress | cytosol | 26.17 | 26.99 |
Protein Annotations
| Gene3D:2.60.40.1170 | MapMan:22.1.2.3 | Gene3D:3.30.450.60 | EntrezGene:842372 | ProteinID:AAB71967.1 | ProteinID:AEE33731.1 |
| InterPro:AP2_Mu_C_sf | InterPro:AP_mu_sigma_su | ArrayExpress:AT1G60780 | EnsemblPlantsGene:AT1G60780 | RefSeq:AT1G60780 | TAIR:AT1G60780 |
| RefSeq:AT1G60780-TAIR-G | EnsemblPlants:AT1G60780.1 | TAIR:AT1G60780.1 | EMBL:AY099652 | Unigene:At.36589 | EMBL:BT002144 |
| InterPro:Clathrin_mu | InterPro:Clathrin_mu_CS | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0030131 | GO:GO:0030665 |
| GO:GO:0031410 | GO:GO:0031901 | Symbol:HAP13 | InterPro:IPR028565 | InterPro:Longin-like_dom_sf | InterPro:MHD |
| RefSeq:NP_176277.1 | UniProt:O22715 | PFAM:PF00928 | PFAM:PF01217 | PIRSF:PIRSF005992 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00314 | ScanProsite:PS00990 | ScanProsite:PS00991 | PFscan:PS51072 |
| PANTHER:PTHR10529 | PANTHER:PTHR10529:SF338 | SUPFAM:SSF49447 | SUPFAM:SSF64356 | UniParc:UPI00000ABFCE | : |
Description
AP1M2AP-1 complex subunit mu-2 [Source:UniProtKB/Swiss-Prot;Acc:O22715]
Coordinates
chr1:-:22368953..22372223
Molecular Weight (calculated)
49034.9 Da
IEP (calculated)
6.291
GRAVY (calculated)
-0.228
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAASALFL LDIKGRVLVW RDYRGDVSAA QAERFFTKLI EKEGDSQSND PVAYDNGVTY MFVQHSNVYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGIQYKK NEVFLDVIEN VNILVNSNGQ IVRSDVVGAL
201: KMRTYLTGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGAFDLMTY RLSTQVKPLI WVEAQIESHS RSRVEMLIKA
301: RSQFKERSTA TNVEIELPVP TDASNPTVRT SLGSASYAPE KDALVWKIKS FPGNKEYMLR AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLV
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGIQYKK NEVFLDVIEN VNILVNSNGQ IVRSDVVGAL
201: KMRTYLTGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGAFDLMTY RLSTQVKPLI WVEAQIESHS RSRVEMLIKA
301: RSQFKERSTA TNVEIELPVP TDASNPTVRT SLGSASYAPE KDALVWKIKS FPGNKEYMLR AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.