Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d011676_P001 | |
| Zm00001d036168_P001 | |
| Zm00001d043726_P001 | |
| Zm00001d052338_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069426 | Potato | cytosol | 86.44 | 38.35 |
| GSMUA_Achr8P31910_001 | Banana | cytosol | 61.02 | 22.36 |
| PGSC0003DMT400002906 | Potato | mitochondrion | 83.05 | 22.27 |
| Solyc04g026380.2.1 | Tomato | cytosol | 83.05 | 20.85 |
| Zm00001d043726_P001 | Maize | cytosol | 93.22 | 12.82 |
| Zm00001d011676_P001 | Maize | extracellular, plasma membrane | 91.53 | 12.59 |
| Solyc06g071650.1.1 | Tomato | cytosol, plastid | 86.44 | 12.26 |
| VIT_00s0225g00220.t01 | Wine grape | cytosol | 86.44 | 11.92 |
| Bra031752.1-P | Field mustard | cytosol | 83.05 | 11.56 |
| Zm00001d036168_P001 | Maize | mitochondrion | 47.46 | 11.52 |
| Solyc05g013340.2.1 | Tomato | plastid | 83.05 | 11.5 |
| CDY46183 | Canola | cytosol | 83.05 | 11.45 |
| CDY54239 | Canola | cytosol | 83.05 | 11.45 |
| CDY61312 | Canola | cytosol | 83.05 | 11.45 |
| CDY63681 | Canola | cytosol | 83.05 | 11.45 |
| Bra031481.1-P | Field mustard | cytosol | 83.05 | 11.45 |
| AT1G60780.1 | Thale cress | cytosol | 81.36 | 11.21 |
| KRH69617 | Soybean | cytosol | 81.36 | 11.21 |
| KRH45615 | Soybean | cytosol | 81.36 | 11.21 |
| KRG99414 | Soybean | cytosol | 81.36 | 11.21 |
| CDY19316 | Canola | cytosol | 81.36 | 11.21 |
| CDX97909 | Canola | cytosol | 81.36 | 11.21 |
| Bra019904.1-P | Field mustard | cytosol | 81.36 | 11.21 |
| KRH74545 | Soybean | endoplasmic reticulum | 79.66 | 10.98 |
| AT1G10730.1 | Thale cress | cytosol | 77.97 | 10.75 |
| CDY63680 | Canola | cytosol | 77.97 | 10.62 |
| Zm00001d049311_P001 | Maize | cytosol | 18.64 | 4.87 |
| Zm00001d044264_P001 | Maize | cytosol | 22.03 | 4.35 |
| Zm00001d021311_P001 | Maize | plastid | 13.56 | 3.45 |
| Zm00001d002305_P001 | Maize | mitochondrion | 22.03 | 3.04 |
| Zm00001d054005_P006 | Maize | cytosol | 22.03 | 2.99 |
| Zm00001d017675_P003 | Maize | cytosol, endoplasmic reticulum | 22.03 | 2.49 |
| Zm00001d006386_P001 | Maize | cytosol, plastid | 10.17 | 2.05 |
| Zm00001d002925_P002 | Maize | plastid | 32.2 | 1.35 |
| Solyc04g026360.2.1 | Tomato | nucleus | 3.39 | 0.88 |
| Zm00001d032192_P001 | Maize | extracellular, golgi | 5.08 | 0.69 |
Protein Annotations
| EnsemblPlants:Zm00001d052338_P001 | EnsemblPlants:Zm00001d052338_T001 | EnsemblPlantsGene:Zm00001d052338 | Gene3D:2.60.40.1170 | InterPro:AP2_Mu_C_sf | PANTHER:PTHR10529 |
| PANTHER:PTHR10529:SF338 | ProteinID:AQK57004.1 | SUPFAM:SSF49447 | UniParc:UPI000843DC2B | UniProt:A0A1D6QGI2 | MapMan:35.1 |
Description
AP-1 complex subunit mu-2
Coordinates
chr4:-:187390157..187391133
Molecular Weight (calculated)
6766.4 Da
IEP (calculated)
10.029
GRAVY (calculated)
-0.075
Length
59 amino acids
Sequence
(BLAST)
(BLAST)
1: MGSVAYAPER DAMVWKVKSF PGGKGIQVRY LKIIEKSGYQ ALPWVRYITM AGEYELRLI
001: MAGAASALFL LDIKGRVLVW RDYRGDVSAA QAERFFTKLI EKEGDSQSND PVAYDNGVTY MFVQHSNVYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGIQYKK NEVFLDVIEN VNILVNSNGQ IVRSDVVGAL
201: KMRTYLTGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGAFDLMTY RLSTQVKPLI WVEAQIESHS RSRVEMLIKA
301: RSQFKERSTA TNVEIELPVP TDASNPTVRT SLGSASYAPE KDALVWKIKS FPGNKEYMLR AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLV
101: LEEESLRDNF VVVYELLDEM MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGIQYKK NEVFLDVIEN VNILVNSNGQ IVRSDVVGAL
201: KMRTYLTGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGAFDLMTY RLSTQVKPLI WVEAQIESHS RSRVEMLIKA
301: RSQFKERSTA TNVEIELPVP TDASNPTVRT SLGSASYAPE KDALVWKIKS FPGNKEYMLR AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL
401: KIIEKSGYQA LPWVRYITMA GEYELRLV
Arabidopsis Description
AP1M2AP-1 complex subunit mu-2 [Source:UniProtKB/Swiss-Prot;Acc:O22715]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.