CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61131	Soybean	cytosol, nucleus	95.32	82.84
GSMUA_Achr10P...	Banana	cytosol	74.81	72.0
GSMUA_Achr6P10200_001	Banana	cytosol	76.36	70.17
Solyc04g076230.2.1	Tomato	cytosol	81.3	69.25
KRH16840	Soybean	cytosol	80.78	68.81
PGSC0003DMT400024188	Potato	cytosol	80.26	68.36
Bra013813.1-P	Field mustard	cytosol	78.18	67.49
KRH72454	Soybean	cytosol	70.39	67.25
AT4G24550.2	Thale cress	cytosol	78.44	66.96
CDY34290	Canola	cytosol	78.18	66.45
VIT_18s0001g13000.t01	Wine grape	cytosol	85.45	66.2
Bra010489.1-P	Field mustard	cytosol	77.66	66.0
CDY03442	Canola	cytosol	77.66	66.0
EER97557	Sorghum	cytosol, peroxisome, plastid	76.62	65.56
TraesCS2B01G191200.1	Wheat	golgi	76.1	64.97
Os07t0620300-01	Rice	plasma membrane	76.1	64.97
CDY24840	Canola	cytosol	76.88	63.93
CDX92642	Canola	cytosol	76.36	63.36
CDY08937	Canola	cytosol	74.81	63.16
CDY11020	Canola	cytosol	35.32	62.67
TraesCS2D01G172100.1	Wheat	peroxisome	72.99	62.31
Bra019220.1-P	Field mustard	cytosol	72.21	60.17
HORVU2Hr1G030220.1	Barley	cytosol, mitochondrion, peroxisome, plastid	76.1	57.68
KRH69617	Soybean	cytosol	29.09	26.17
KRH74545	Soybean	endoplasmic reticulum	28.83	25.93
KRH45615	Soybean	cytosol	28.31	25.47
KRG99414	Soybean	cytosol	28.31	25.47
KRH04335	Soybean	endoplasmic reticulum	27.01	23.74
KRH77207	Soybean	cytosol, extracellular	26.75	23.52
KRH58201	Soybean	mitochondrion	26.49	23.29
KRH28283	Soybean	cytosol, golgi	25.97	22.83
KRG96704	Soybean	cytosol	23.38	21.69
KRH68423	Soybean	cytosol	23.9	21.05
KRH33789	Soybean	cytosol	22.34	20.72
Zm00001d002925_P002	Maize	plastid	63.64	17.45

Protein Annotations

Gene3D:2.60.40.1170	MapMan:22.5.2.2.3	Gene3D:3.30.450.60	UniProt:A0A0R0JB42	EMBL:ACUP02003392	InterPro:AP2_Mu_C_sf
InterPro:Clathrin_mu	EnsemblPlantsGene:GLYMA_06G029800	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030131	InterPro:IPR028565	EnsemblPlants:KRH51806	ProteinID:KRH51806	ProteinID:KRH51806.1	InterPro:Longin-like_dom_sf
InterPro:MHD	PFAM:PF00928	PIRSF:PIRSF005992	PRINTS:PR00314	PFscan:PS51072	PANTHER:PTHR10529
PANTHER:PTHR10529:SF270	SUPFAM:SSF49447	SUPFAM:SSF64356	UniParc:UPI0006EDA87D	:	:

Description

hypothetical protein

Coordinates

chr6:+:2332583..2338556

Molecular Weight (calculated)

43052.5 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.124

Length

385 amino acids

Sequence
(BLAST)

001: MILQFFVLSQ RGDNIVYRDS QKGSAETFFR KVKFWKENAE GDAPPVFNID GVNYFHVKAA GLLFVATTRV NVSPSLVLEL LQRIARVIKD YLGVLNEDSF
101: RKNFVLVYEL LDEVIDFGYV QTTSTEVLKS YVFNEPIVID AARMPPLGPA SIFMQGTKRM PGTAITKSVV TNEPGGRKRD EIFVDVIEKI SVTFNSSGYI
201: LTSEIDGTIQ MKSYLTGNPE IRLALNEDLS IGTSDYRGSG AVILDDCNFH ESVHLDSFDV DRTLSLVQPE GEFPVMNYHM TQPFKPPFRI NALIEETGSL
301: NAEVTIKVRA EFNSSINANT VLVEMPLPSF TARVNFELEP GAVGHTTDFK EANKRLEWGL KKVGGGSEHT LRAKLTFSRS YMEIS

Best Arabidopsis Sequence Match ( AT4G24550.3 )
(BLAST)

001: MMISQFFVLS QRGDNIVFRD YRAEVPKGST ETFFRKVKFW KEDGNAEAPP IFNVDGVNYF HVKVVGLYFV ATTRVNVSPS LVLELLQRIA RVIKDYLGVL
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKVISQRK QGQSA

Arabidopsis Description

AP4MAP4M [Source:UniProtKB/TrEMBL;Acc:A0A178UX13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.