Factsheet for HORVU2Hr1G030220.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G191200.1	Wheat	golgi	88.58	99.78
TraesCS2D01G172100.1	Wheat	peroxisome	85.83	96.67
EER97557	Sorghum	cytosol, peroxisome, plastid	83.66	94.44
Os07t0620300-01	Rice	plasma membrane	82.28	92.68
Solyc04g076230.2.1	Tomato	cytosol	73.43	82.52
AT4G24550.2	Thale cress	cytosol	71.46	80.49
KRH72454	Soybean	cytosol	63.78	80.4
PGSC0003DMT400024188	Potato	cytosol	71.46	80.31
GSMUA_Achr10P...	Banana	cytosol	62.8	79.75
Bra010489.1-P	Field mustard	cytosol	70.47	79.03
KRH16840	Soybean	cytosol	70.08	78.76
Bra013813.1-P	Field mustard	cytosol	69.09	78.7
KRH61131	Soybean	cytosol, nucleus	67.91	77.88
GSMUA_Achr6P10200_001	Banana	cytosol	64.17	77.8
CDY34290	Canola	cytosol	69.29	77.7
CDY03442	Canola	cytosol	68.9	77.26
CDX92642	Canola	cytosol	69.88	76.51
KRH51806	Soybean	cytosol	57.68	76.1
CDY24840	Canola	cytosol	69.29	76.03
CDY08937	Canola	cytosol	67.91	75.66
Bra019220.1-P	Field mustard	cytosol	65.35	71.86
CDY11020	Canola	cytosol	30.12	70.51
VIT_18s0001g13000.t01	Wine grape	cytosol	68.7	70.22
HORVU3Hr1G066020.1	Barley	cytosol	28.74	34.03
HORVU1Hr1G079050.3	Barley	cytosol	27.95	33.1
HORVU6Hr1G043980.1	Barley	endoplasmic reticulum, plasma membrane	2.17	30.56
HORVU2Hr1G030200.1	Barley	endoplasmic reticulum, plasma membrane	2.17	30.56
HORVU1Hr1G014710.1	Barley	endoplasmic reticulum, plasma membrane	2.17	30.56
HORVU6Hr1G066890.2	Barley	mitochondrion	26.18	28.18
HORVU1Hr1G057140.1	Barley	cytosol	21.06	25.66
Zm00001d002925_P002	Maize	plastid	68.11	24.64

Protein Annotations

Gene3D:2.60.40.1170	MapMan:22.5.2.2.3	Gene3D:3.30.450.60	UniProt:A0A287HJE6	InterPro:AP2_Mu_C_sf	InterPro:Clathrin_mu
InterPro:Clathrin_mu_CS	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005802	GO:GO:0005829	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0030124	GO:GO:0030131	EnsemblPlantsGene:HORVU2Hr1G030220	EnsemblPlants:HORVU2Hr1G030220.1
InterPro:IPR028565	InterPro:Longin-like_dom_sf	InterPro:MHD	PFAM:PF00928	PIRSF:PIRSF005992	PRINTS:PR00314
ScanProsite:PS00991	PFscan:PS51072	PANTHER:PTHR10529	PANTHER:PTHR10529:SF270	SUPFAM:SSF49447	SUPFAM:SSF64356
UniParc:UPI000B461D1C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:110653969..110658439

Molecular Weight (calculated)

56646.0 Da

IEP (calculated)

8.181

GRAVY (calculated)

-0.235

Length

508 amino acids

Sequence
(BLAST)

001: PVQLRAVLVG VFFPPPRLHL PVLAHAVCSS NRRGVTSQPP GARPEEGGAG DRRRGGEMIS QFFVLSQRGD HIVFRDYRGE VPKGSAEIFF RKVKFWNEDE
101: AEEAPPVFNI DGVNYVHVKV AGLFFVVTTM VNISPSLLLE LLQRIARVTK DYLGVLNEDS LRKNFILVYE LLDEVIDFGY PQTTSTEALK SYIFNEPIMV
201: DAGRLPPLGP AAMFMQGTKR MPGTAVTKSV VANEPGGKKR EEIFVDIIEK ISVTFSSSGY ILTSEIDGTI QMKSYLSGNP EIRLALNEDL GIGKNSSSTH
301: DYRSSSGGGS VVLDDCNFHE SVQLDSFDID RTLHLIPPDG EFPVMNYRMT QEFKPPFRVT ALIEEAGPSR AEVLLKIRAD FPANVTANTI TVQMPVPSYT
401: MRASFELEAG AVGQTTDFKE GTRRLEWNLK KIVGGSEHTL RAKLTFSQET HGNLTKEAGP VNMNFTIPMY NASKLQVRYL QIAKKSKTYN PYRWVRYVTQ
501: ANSYVARL

Best Arabidopsis Sequence Match ( AT4G24550.2 )
(BLAST)

001: MMISQFFVLS QRGDNIVFRD YRAEVPKGST ETFFRKVKFW KEDGNAEAPP IFNVDGVNYF HVKVVGLYFV ATTRVNVSPS LVLELLQRIA RVIKDYLGVL
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKIVGGGE HTLRAKLTFS QEFHGNITKE
401: AGPVSMTFTI PMYNVSKLQV KYLQIAKKSS SYNPYRWVRY VTQANSYVAR I

Arabidopsis Description

AP4MAP4M [Source:UniProtKB/TrEMBL;Acc:A0A178UX13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.