Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72454 | Soybean | cytosol | 86.28 | 96.77 |
| Solyc04g076230.2.1 | Tomato | cytosol | 83.41 | 83.41 |
| PGSC0003DMT400024188 | Potato | cytosol | 82.3 | 82.3 |
| KRH61131 | Soybean | cytosol, nucleus | 80.31 | 81.94 |
| Bra013813.1-P | Field mustard | cytosol | 80.31 | 81.39 |
| AT4G24550.2 | Thale cress | cytosol | 80.97 | 81.15 |
| KRH51806 | Soybean | cytosol | 68.81 | 80.78 |
| Bra010489.1-P | Field mustard | cytosol | 80.75 | 80.57 |
| CDY34290 | Canola | cytosol | 80.53 | 80.35 |
| EER97557 | Sorghum | cytosol, peroxisome, plastid | 79.65 | 80.0 |
| CDY03442 | Canola | cytosol | 79.87 | 79.69 |
| TraesCS2B01G191200.1 | Wheat | golgi | 78.98 | 79.16 |
| Os07t0620300-01 | Rice | plasma membrane | 78.32 | 78.49 |
| CDY24840 | Canola | cytosol | 79.87 | 77.97 |
| CDX92642 | Canola | cytosol | 79.65 | 77.59 |
| CDY08937 | Canola | cytosol | 77.88 | 77.19 |
| GSMUA_Achr10P... | Banana | cytosol | 67.26 | 76.0 |
| TraesCS2D01G172100.1 | Wheat | peroxisome | 75.66 | 75.83 |
| GSMUA_Achr6P10200_001 | Banana | cytosol | 69.03 | 74.46 |
| Bra019220.1-P | Field mustard | cytosol | 75.66 | 74.03 |
| VIT_18s0001g13000.t01 | Wine grape | cytosol | 79.87 | 72.64 |
| CDY11020 | Canola | cytosol | 34.51 | 71.89 |
| HORVU2Hr1G030220.1 | Barley | cytosol, mitochondrion, peroxisome, plastid | 78.76 | 70.08 |
| KRG99414 | Soybean | cytosol | 31.19 | 32.94 |
| KRH45615 | Soybean | cytosol | 31.19 | 32.94 |
| KRH69617 | Soybean | cytosol | 31.19 | 32.94 |
| KRH74545 | Soybean | endoplasmic reticulum | 30.97 | 32.71 |
| KRH77207 | Soybean | cytosol, extracellular | 28.54 | 29.45 |
| KRH28283 | Soybean | cytosol, golgi | 28.1 | 29.0 |
| KRH04335 | Soybean | endoplasmic reticulum | 27.88 | 28.77 |
| KRH58201 | Soybean | mitochondrion | 27.65 | 28.54 |
| KRG96704 | Soybean | cytosol | 24.34 | 26.51 |
| KRH33789 | Soybean | cytosol | 23.89 | 26.02 |
| KRH68423 | Soybean | cytosol | 24.78 | 25.63 |
| Zm00001d002925_P002 | Maize | plastid | 65.49 | 21.08 |
Protein Annotations
| EntrezGene:100807075 | Gene3D:2.60.40.1170 | MapMan:22.5.2.2.3 | Gene3D:3.30.450.60 | UniProt:A0A0R0GNH6 | EMBL:ACUP02009023 |
| InterPro:AP2_Mu_C_sf | InterPro:Clathrin_mu | EnsemblPlantsGene:GLYMA_14G181300 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030131 | InterPro:IPR028565 | EnsemblPlants:KRH16840 | ProteinID:KRH16840 | ProteinID:KRH16840.1 |
| InterPro:Longin-like_dom_sf | InterPro:MHD | PFAM:PF00928 | PIRSF:PIRSF005992 | PRINTS:PR00314 | PFscan:PS51072 |
| PANTHER:PTHR10529 | PANTHER:PTHR10529:SF270 | SUPFAM:SSF49447 | SUPFAM:SSF64356 | UniParc:UPI0003DE9E51 | : |
Description
hypothetical protein
Coordinates
chr14:-:44416783..44424299
Molecular Weight (calculated)
50557.6 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.113
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MISQFFVLSQ RGDNIVFRDY RGEVQKGSAE IFFRKVKFWE DGGLQEAPPV FNVDGVNYFH VKVVGLLFVA TTRVNTSPSF VLELLQRIAR VIKDYLGILN
101: EDSLRKNFVL VYELLDEVID FGYVQTTSTE LLKSYVFNEP LVIDAAHLSP LGPAAIFTQG TKRMPGIAVT KSVVATEPGG RKREEIFVDI IEKISITFSS
201: SGYILTSEID GTIQMKSYLS GNPEIRLALN DDLSIGRSQG PAYAGYRSSS DSGTVILDDC NFHESVRLDS FDIDRTLSLV PPDGEFPVMN YRLTQEFRPP
301: FRINALIEEA GSLKAEVILK VSAEFASSVT ANTIKVQMPL PKCTSRVSFE LEPGAVGQTT DFKEANKRLE WSLRKIVGGS EHTLRAKLTF SQESPVNVTK
401: ESGPVSMTFT IPMHNVSRLQ VKYLQIAKKS ATHEPYRWVR YVTQANSYVA RI
101: EDSLRKNFVL VYELLDEVID FGYVQTTSTE LLKSYVFNEP LVIDAAHLSP LGPAAIFTQG TKRMPGIAVT KSVVATEPGG RKREEIFVDI IEKISITFSS
201: SGYILTSEID GTIQMKSYLS GNPEIRLALN DDLSIGRSQG PAYAGYRSSS DSGTVILDDC NFHESVRLDS FDIDRTLSLV PPDGEFPVMN YRLTQEFRPP
301: FRINALIEEA GSLKAEVILK VSAEFASSVT ANTIKVQMPL PKCTSRVSFE LEPGAVGQTT DFKEANKRLE WSLRKIVGGS EHTLRAKLTF SQESPVNVTK
401: ESGPVSMTFT IPMHNVSRLQ VKYLQIAKKS ATHEPYRWVR YVTQANSYVA RI
001: MMISQFFVLS QRGDNIVFRD YRAEVPKGST ETFFRKVKFW KEDGNAEAPP IFNVDGVNYF HVKVVGLYFV ATTRVNVSPS LVLELLQRIA RVIKDYLGVL
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKIVGGGE HTLRAKLTFS QEFHGNITKE
401: AGPVSMTFTI PMYNVSKLQV KYLQIAKKSS SYNPYRWVRY VTQANSYVAR I
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKIVGGGE HTLRAKLTFS QEFHGNITKE
401: AGPVSMTFTI PMYNVSKLQV KYLQIAKKSS SYNPYRWVRY VTQANSYVAR I
Arabidopsis Description
AP4MAP4M [Source:UniProtKB/TrEMBL;Acc:A0A178UX13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.