Factsheet for GSMUA_Achr10P19270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10200_001	Banana	cytosol	86.25	82.34
KRH51806	Soybean	cytosol	72.0	74.81
Os07t0620300-01	Rice	plasma membrane	81.25	72.06
EER97557	Sorghum	cytosol, peroxisome, plastid	80.25	71.33
TraesCS2B01G191200.1	Wheat	golgi	79.75	70.73
TraesCS2D01G172100.1	Wheat	peroxisome	76.25	67.63
KRH16840	Soybean	cytosol	76.0	67.26
KRH61131	Soybean	cytosol, nucleus	74.0	66.82
CDY34290	Canola	cytosol	75.5	66.67
PGSC0003DMT400024188	Potato	cytosol	75.25	66.59
CDY03442	Canola	cytosol	75.25	66.45
Solyc04g076230.2.1	Tomato	cytosol	75.0	66.37
CDY11020	Canola	cytosol	36.0	66.36
AT4G24550.2	Thale cress	cytosol	74.75	66.3
Bra010489.1-P	Field mustard	cytosol	75.0	66.23
KRH72454	Soybean	cytosol	66.25	65.76
CDY08937	Canola	cytosol	74.75	65.57
CDY24840	Canola	cytosol	75.75	65.44
Bra013813.1-P	Field mustard	cytosol	72.75	65.25
CDX92642	Canola	cytosol	73.0	62.93
HORVU2Hr1G030220.1	Barley	cytosol, mitochondrion, peroxisome, plastid	79.75	62.8
VIT_18s0001g13000.t01	Wine grape	cytosol	77.0	61.97
Bra019220.1-P	Field mustard	cytosol	68.0	58.87
GSMUA_Achr1P25430_001	Banana	cytosol, extracellular	30.75	28.74
GSMUA_Achr7P17600_001	Banana	cytosol	30.5	28.5
GSMUA_Achr2P06510_001	Banana	cytosol, endoplasmic reticulum	30.25	28.27
GSMUA_Achr4P28880_001	Banana	cytosol	29.0	26.48
GSMUA_Achr5P21080_001	Banana	cytosol	24.5	23.56
Zm00001d002925_P002	Maize	plastid	69.5	19.8
GSMUA_Achr2P12100_001	Banana	cytosol	29.0	19.5
GSMUA_Achr8P31910_001	Banana	cytosol	3.5	8.7

Protein Annotations

Gene3D:2.60.40.1170	MapMan:22.5.2.2.3	Gene3D:3.30.450.60	InterPro:AP2_Mu_C_sf	InterPro:AP_mu_sigma_su	InterPro:Clathrin_mu
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	GO:GO:0030131
EnsemblPlantsGene:GSMUA_Achr10G19270_001	EnsemblPlants:GSMUA_Achr10P19270_001	EnsemblPlants:GSMUA_Achr10T19270_001	InterPro:IPR028565	InterPro:Longin-like_dom_sf	UniProt:M0RJK2
InterPro:MHD	PFAM:PF00928	PFAM:PF01217	PIRSF:PIRSF005992	PRINTS:PR00314	PFscan:PS51072
PANTHER:PTHR10529	PANTHER:PTHR10529:SF270	SUPFAM:SSF49447	SUPFAM:SSF64356	TMHMM:TMhelix	UniParc:UPI000296EEBC

Description

Putative AP-4 complex subunit mu [Source:GMGC_GENE;Acc:GSMUA_Achr10G19270_001]

Coordinates

chr10:-:25698341..25705333

Molecular Weight (calculated)

44904.8 Da

IEP (calculated)

4.825

GRAVY (calculated)

-0.008

Length

400 amino acids

Sequence
(BLAST)

001: MIAQFFVLSQ RGDNIVFRDY RGEVSKGSAE IFFRKVKFWK EDEEEEAPPV FNVDGVNYIH VKIAGLFFVT TTRVNVSPSL VLELLQRIAR VTKDYLGVLN
101: EDSLRKNFVL VYELLDEVID FGYPQTTSTE VLKSYVFNEP IVIDSTRVPP LGPASMFMQG TKKMPGTAVT KSVIVTEPGG RKREEIFVDI IEKISVTFSS
201: SGYILTSEID GTIQMKSYLT GSPEIRLALN EDLSIGRNSS SVYDYRSSAG GAVILDDCNF HESVRLDSFD VDRTLSLIPP DGEFAAMNYR MTQEFKPPFR
301: VSALIEEAGQ LKAEAIIKIR ADFAASVTAN TIIVQMPVPT YTARVSFELE SGAVGQTADF KEGAKRLEWC LKKAGFSSMF FVLLYLCCYF TNYINFTTYQ

Best Arabidopsis Sequence Match ( AT4G24550.2 )
(BLAST)

001: MMISQFFVLS QRGDNIVFRD YRAEVPKGST ETFFRKVKFW KEDGNAEAPP IFNVDGVNYF HVKVVGLYFV ATTRVNVSPS LVLELLQRIA RVIKDYLGVL
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKIVGGGE HTLRAKLTFS QEFHGNITKE
401: AGPVSMTFTI PMYNVSKLQV KYLQIAKKSS SYNPYRWVRY VTQANSYVAR I

Arabidopsis Description

AP4MAP4M [Source:UniProtKB/TrEMBL;Acc:A0A178UX13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.