Factsheet for GSMUA_Achr2P12100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P28880_001	Banana	cytosol	72.94	99.09
VIT_02s0012g00910.t01	Wine grape	cytosol, extracellular	72.27	98.17
EES07425	Sorghum	cytosol, extracellular	71.93	97.72
Os02t0690700-01	Rice	plasma membrane	71.76	97.49
KRH77207	Soybean	cytosol, extracellular	71.26	96.8
TraesCS6A01G263800.1	Wheat	extracellular	71.26	96.8
TraesCS6D01G251100.1	Wheat	extracellular	71.26	96.8
Solyc08g006960.2.1	Tomato	cytosol, extracellular	71.09	96.58
TraesCS6B01G290800.1	Wheat	golgi	71.09	96.58
PGSC0003DMT400052825	Potato	cytosol, extracellular	70.92	96.35
KRH58201	Soybean	mitochondrion	70.42	95.66
CDY35171	Canola	cytosol	70.25	95.43
CDY03204	Canola	cytosol	70.25	95.43
Bra025009.1-P	Field mustard	cytosol	70.25	95.43
Bra017537.1-P	Field mustard	cytosol	70.25	95.43
CDY63050	Canola	cytosol	70.08	95.21
CDX87692	Canola	cytosol	70.08	95.21
KRH04335	Soybean	endoplasmic reticulum	70.08	95.21
Solyc06g061150.2.1	Tomato	nucleus	70.08	94.99
Bra022052.1-P	Field mustard	cytosol	69.92	94.98
CDX77680	Canola	cytosol	69.58	94.52
KRH28283	Soybean	cytosol, golgi	69.58	94.52
CDY67244	Canola	cytosol	42.02	94.34
AT5G46630.2	Thale cress	cytosol	67.06	90.48
HORVU6Hr1G066890.2	Barley	mitochondrion	70.76	89.19
Zm00001d017675_P003	Maize	cytosol, endoplasmic reticulum	68.74	78.35
GSMUA_Achr1P25430_001	Banana	cytosol, extracellular	28.74	39.95
GSMUA_Achr7P17600_001	Banana	cytosol	28.57	39.72
GSMUA_Achr2P06510_001	Banana	cytosol, endoplasmic reticulum	28.57	39.72
GSMUA_Achr10P...	Banana	cytosol	19.5	29.0
GSMUA_Achr6P10200_001	Banana	cytosol	20.34	28.88
GSMUA_Achr8P31910_001	Banana	cytosol	6.89	25.47
GSMUA_Achr5P21080_001	Banana	cytosol	15.46	22.12

Protein Annotations

Gene3D:2.60.40.1170	MapMan:22.1.3.3	Gene3D:3.30.450.60	InterPro:AP2_Mu_C_sf	InterPro:Clathrin_mu	InterPro:Clathrin_mu_CS
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030131	EnsemblPlantsGene:GSMUA_Achr2G12100_001
EnsemblPlants:GSMUA_Achr2P12100_001	EnsemblPlants:GSMUA_Achr2T12100_001	InterPro:IPR028565	InterPro:Longin-like_dom_sf	UniProt:M0S7A1	InterPro:MHD
PFAM:PF00928	PRINTS:PR00314	ScanProsite:PS00990	PFscan:PS51072	PANTHER:PTHR10529	PANTHER:PTHR10529:SF278
SUPFAM:SSF49447	SUPFAM:SSF64356	UniParc:UPI00029577A3	SEG:seg	:	:

Description

AP-2 complex subunit mu [Source:GMGC_GENE;Acc:GSMUA_Achr2G12100_001]

Coordinates

chr2:-:14642443..14655046

Molecular Weight (calculated)

67206.2 Da

IEP (calculated)

10.369

GRAVY (calculated)

-0.141

Length

595 amino acids

Sequence
(BLAST)

001: MARNSPSENL NGDRWATKGL QFTCSSTLLQ LKFLKLVQTS EVLLLSSPMF LITSYTIKRN RIRNNTRKRT HKRNKNNRIP LGRPQTLFPS PPPPQILTFR
101: TSASQIRDPS RRIPRSWPAW VLREELLPAF LGSAILACRR ISIRRDPSGT GVSAVEEMPV AASAIYFLNL RGDVLINRLY RDDVGGNMVD AFRMHIMQTK
201: ELGTCPVRQI GGCSFLYMRI SNVYIVIVVS SNANVACAFK FVVEAVALFK SYFGGAFDED AIRNNFVLIY ELLDEIMDFG YPQNLSPEIL KLYITQEGVR
301: SPFSSKPSDK PVPNATLQVT GAVGWRREGL VYKKNEVFLD IVESVNLLMS SKGSVLRCDV TGKILMKCFL SGMPDLKLGL NDKIGLEKES QLKSRPIKSG
401: KTIELDDVTF HQCVNLTRFN SEKTVSFVPP DGEFELMKYR ITEGVNLPFR VLPTIKELGR TRMEVNVKVK SVFGAKMFAL GVVVKVPVPK QTAKTSFQVT
501: SGRAKYNASI DCLVWKIRKF PGQTESTMSA EVELISTMAE KKSWTRPPIQ MEFQVPMFTA SGLRVRFLKV WEKSGYNTVE WVRYITKAGS YEIRC

Best Arabidopsis Sequence Match ( AT5G46630.1 )
(BLAST)

001: MPVAASAIYF LNLRGDVLIN RTYRDDVGGN MVDAFRTHIM QTKELGNCPV RQIGGCSFVY MRISNVYIVI VVSSNANVAC GFKFVVEAVA LFKSYFGGAF
101: DEDAIRNNFV LIYELLDEIM DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLAYKKNEV FLDIVESVNL LMSSKGNVLR
201: CDVTGKVLMK CFLSGMPDLK LGLNDKIGLE KESEMKSRPA KSGKTIELDD VTFHQCVNLT RFNSEKTVSF VPPDGEFELM KYRITEGVNL PFRVLPTIKE
301: LGRTRMEVNV KVKSVFGAKM FALGVVVKIP VPKQTAKTNF QVTTGRAKYN PSIDCLVWKI RKFPGQTEST LSAEIELIST MGEKKSWTRP PIQMEFQVPM
401: FTASGLRVRF LKVWEKSGYN TVEWVRYITK AGSYEIRC

Arabidopsis Description

Clathrin adaptor complexes medium subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4KHJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.