Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022052.1-P | Field mustard | cytosol | 99.62 | 60.27 |
| CDY35171 | Canola | cytosol | 99.25 | 60.05 |
| CDX87692 | Canola | cytosol | 99.25 | 60.05 |
| CDY03204 | Canola | cytosol | 99.25 | 60.05 |
| CDY63050 | Canola | cytosol | 98.11 | 59.36 |
| CDX77680 | Canola | cytosol | 98.11 | 59.36 |
| AT5G46630.2 | Thale cress | cytosol | 98.49 | 59.18 |
| VIT_02s0012g00910.t01 | Wine grape | cytosol, extracellular | 94.72 | 57.31 |
| Os02t0690700-01 | Rice | plasma membrane | 94.34 | 57.08 |
| EES07425 | Sorghum | cytosol, extracellular | 94.34 | 57.08 |
| KRH77207 | Soybean | cytosol, extracellular | 93.96 | 56.85 |
| TraesCS6A01G263800.1 | Wheat | extracellular | 93.21 | 56.39 |
| Solyc08g006960.2.1 | Tomato | cytosol, extracellular | 93.21 | 56.39 |
| TraesCS6D01G251100.1 | Wheat | extracellular | 93.21 | 56.39 |
| GSMUA_Achr4P28880_001 | Banana | cytosol | 93.21 | 56.39 |
| TraesCS6B01G290800.1 | Wheat | golgi | 92.83 | 56.16 |
| PGSC0003DMT400052825 | Potato | cytosol, extracellular | 92.83 | 56.16 |
| KRH58201 | Soybean | mitochondrion | 92.45 | 55.94 |
| KRH28283 | Soybean | cytosol, golgi | 92.08 | 55.71 |
| KRH04335 | Soybean | endoplasmic reticulum | 92.08 | 55.71 |
| Solyc06g061150.2.1 | Tomato | nucleus | 90.94 | 54.9 |
| HORVU6Hr1G066890.2 | Barley | mitochondrion | 91.7 | 51.48 |
| Zm00001d017675_P003 | Maize | cytosol, endoplasmic reticulum | 92.45 | 46.93 |
| GSMUA_Achr2P12100_001 | Banana | cytosol | 94.34 | 42.02 |
| CDY54239 | Canola | cytosol | 40.75 | 25.23 |
| CDY19316 | Canola | cytosol | 40.75 | 25.23 |
| CDY61312 | Canola | cytosol | 40.38 | 25.0 |
| CDX97909 | Canola | cytosol | 40.38 | 25.0 |
| CDY63681 | Canola | cytosol | 39.62 | 24.53 |
| CDY46183 | Canola | cytosol | 39.62 | 24.53 |
| CDY63680 | Canola | cytosol | 39.62 | 24.25 |
| CDY34290 | Canola | cytosol | 30.19 | 17.66 |
| CDY24840 | Canola | cytosol | 30.57 | 17.49 |
| CDY03442 | Canola | cytosol | 29.81 | 17.44 |
| CDY08937 | Canola | cytosol | 28.68 | 16.67 |
| CDX92642 | Canola | cytosol | 28.3 | 16.16 |
| CDY11020 | Canola | cytosol | 12.45 | 15.21 |
| CDX95277 | Canola | cytosol | 21.13 | 12.87 |
| CDY41703 | Canola | cytosol | 21.13 | 12.42 |
Protein Annotations
| Gene3D:2.60.40.1170 | Gene3D:3.30.450.60 | MapMan:35.1 | GO:A0A078JKC5 | UniProt:A0A078JKC5 | InterPro:AP2_Mu_C_sf |
| EnsemblPlants:CDY67244 | ProteinID:CDY67244 | ProteinID:CDY67244.1 | InterPro:Clathrin_mu | InterPro:Clathrin_mu_CS | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030131 | EnsemblPlantsGene:GSBRNA2T00060494001 | InterPro:IPR028565 |
| InterPro:Longin-like_dom_sf | InterPro:MHD | PFAM:PF00928 | PRINTS:PR00314 | ScanProsite:PS00990 | PFscan:PS51072 |
| PANTHER:PTHR10529 | PANTHER:PTHR10529:SF278 | SUPFAM:SSF49447 | SUPFAM:SSF64356 | UniParc:UPI0004EF0DD0 | SEG:seg |
Description
BnaA02g36610DBnaA02g36610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JKC5]
Coordinates
chrLK035897:+:9611..11118
Molecular Weight (calculated)
29527.9 Da
IEP (calculated)
7.760
GRAVY (calculated)
-0.023
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVAASAIYF LNLRGDVLIN RTYRDDVGGN MVDAFRTHIM QTKELGNCPV RQIGGCSFVY MRISNVYIVI VVSSNANVAC GFKFVVEAVA LFKSYFGGAF
101: DEDAIKNNFV LIYELLDEIM DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLSYKKNEV FLDIVESVNL LMSSKGNVLR
201: CDVTGKVLMK CFLSGMPDLK LGLNDKLGLE KESEMKSRPA KSGKTIELDD VTFHQCVNLT RFNSD
101: DEDAIKNNFV LIYELLDEIM DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLSYKKNEV FLDIVESVNL LMSSKGNVLR
201: CDVTGKVLMK CFLSGMPDLK LGLNDKLGLE KESEMKSRPA KSGKTIELDD VTFHQCVNLT RFNSD
001: MAGAASALFL LDIKGRVLVW RDYRGDVTAA QAERFFTKLI ETEGDSQSND PVAYDNGVTY MFVQHSNIYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE
101: LEEESLRDNF VVVYELLDEM MDFGYPQFTE ARILSEFIKT DAYRMEVTQR PPMAVTNSVS WRSEGLKFKK NEVFLDVIES VNILVNSNGQ IVRSDVVGAL
201: KMRTYLSGMP ECKLGLNDRI LLEAQGRAIK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLI WVEAHIERHS RSRVEMLVKA
301: RSQFKDRSYA TSVEIELPVP TDAYNPDVRT SLGSAAYAPE KDALVWKIQY FYGNKEHTLK ADFHLPSIAA EEATPERKAP IRVKFEIPKF IVSGIQVRYL
401: KIIEKSGYQA HPWVRYITMA GEYELRLM
101: LEEESLRDNF VVVYELLDEM MDFGYPQFTE ARILSEFIKT DAYRMEVTQR PPMAVTNSVS WRSEGLKFKK NEVFLDVIES VNILVNSNGQ IVRSDVVGAL
201: KMRTYLSGMP ECKLGLNDRI LLEAQGRAIK GKAIDLEDIK FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLI WVEAHIERHS RSRVEMLVKA
301: RSQFKDRSYA TSVEIELPVP TDAYNPDVRT SLGSAAYAPE KDALVWKIQY FYGNKEHTLK ADFHLPSIAA EEATPERKAP IRVKFEIPKF IVSGIQVRYL
401: KIIEKSGYQA HPWVRYITMA GEYELRLM
Arabidopsis Description
AP1M1AP-1 complex subunit mu-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAC9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.