Factsheet for HORVU6Hr1G066890.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G263800.1	Wheat	extracellular	91.95	99.09
TraesCS6D01G251100.1	Wheat	extracellular	91.95	99.09
TraesCS6B01G290800.1	Wheat	golgi	91.74	98.86
EES07425	Sorghum	cytosol, extracellular	90.89	97.95
Os02t0690700-01	Rice	plasma membrane	90.68	97.72
GSMUA_Achr4P28880_001	Banana	cytosol	88.14	94.98
VIT_02s0012g00910.t01	Wine grape	cytosol, extracellular	87.71	94.52
KRH77207	Soybean	cytosol, extracellular	86.65	93.38
Solyc08g006960.2.1	Tomato	cytosol, extracellular	86.44	93.15
PGSC0003DMT400052825	Potato	cytosol, extracellular	86.23	92.92
KRH58201	Soybean	mitochondrion	85.81	92.47
KRH04335	Soybean	endoplasmic reticulum	85.59	92.24
Bra025009.1-P	Field mustard	cytosol	85.38	92.01
Bra017537.1-P	Field mustard	cytosol	85.38	92.01
CDY03204	Canola	cytosol	85.38	92.01
CDY35171	Canola	cytosol	85.38	92.01
Solyc06g061150.2.1	Tomato	nucleus	85.38	91.8
CDX87692	Canola	cytosol	85.17	91.78
CDY63050	Canola	cytosol	85.17	91.78
CDY67244	Canola	cytosol	51.48	91.7
Bra022052.1-P	Field mustard	cytosol	84.96	91.55
KRH28283	Soybean	cytosol, golgi	84.75	91.32
CDX77680	Canola	cytosol	84.53	91.1
AT5G46630.2	Thale cress	cytosol	81.36	87.07
Zm00001d017675_P003	Maize	cytosol, endoplasmic reticulum	86.86	78.54
GSMUA_Achr2P12100_001	Banana	cytosol	89.19	70.76
HORVU1Hr1G079050.3	Barley	cytosol	36.23	39.86
HORVU3Hr1G066020.1	Barley	cytosol	34.53	38.0
HORVU2Hr1G030220.1	Barley	cytosol, mitochondrion, peroxisome, plastid	28.18	26.18
HORVU1Hr1G057140.1	Barley	cytosol	20.34	23.02
HORVU6Hr1G043980.1	Barley	endoplasmic reticulum, plasma membrane	1.69	22.22
HORVU2Hr1G030200.1	Barley	endoplasmic reticulum, plasma membrane	1.69	22.22
HORVU1Hr1G014710.1	Barley	endoplasmic reticulum, plasma membrane	1.69	22.22

Protein Annotations

Gene3D:2.60.40.1170	MapMan:22.1.3.3	Gene3D:3.30.450.60	UniProt:A0A287UHP7	InterPro:AP2_Mu_C_sf	InterPro:Clathrin_mu
InterPro:Clathrin_mu_CS	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030131
EnsemblPlantsGene:HORVU6Hr1G066890	EnsemblPlants:HORVU6Hr1G066890.2	InterPro:IPR028565	InterPro:Longin-like_dom_sf	InterPro:MHD	PFAM:PF00928
PIRSF:PIRSF005992	PRINTS:PR00314	ScanProsite:PS00990	PFscan:PS51072	PANTHER:PTHR10529	PANTHER:PTHR10529:SF278
SUPFAM:SSF49447	SUPFAM:SSF64356	UniParc:UPI000B46A735	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:463615967..463621817

Molecular Weight (calculated)

53030.0 Da

IEP (calculated)

10.243

GRAVY (calculated)

-0.131

Length

472 amino acids

Sequence
(BLAST)

001: RKSAPGRGRR PGARPSLPRD LPKTRAPSIP FLPLTVRRAS AIYFLNLRGD VLINRLYRDD VGGNMVDAFR MHIMQTKELG TCPVRQIGGC SFLYMRISNV
101: YIVIVVSSNA NVSCAFKFVV EAVALFKSYF GGTFDEDAIR NNFVLIYELL DEIMDFGYPQ NLSPEILKLY ITQEGVRSPF SSKPSDKPVP NATLQVTGAV
201: GWRREGLVYK KNEVFLDIVE SVNLLMSSKG SVLRCDVTGK ILMKCFLSGM PDLKLGLNDK IGLEKEAQLK SRPSKSGKTI ELDDVTFHQC VNLTRFNSEK
301: TVSFVPPDGE FELMKYRITE GVNLPFRVLP TIKELGRTRM EINVKVKSVF GAKMFALGVV VKVPVPKQTA KTSFQTTSGK AKYNASIDSL VWKIRKFPGQ
401: TEATMSAEVE LISTMGEKKL ANRPPIQMEF QVPMFTASGL RVRFLKVWEK SGYNTVEWVR YITRAGSYEI RC

Best Arabidopsis Sequence Match ( AT5G46630.1 )
(BLAST)

001: MPVAASAIYF LNLRGDVLIN RTYRDDVGGN MVDAFRTHIM QTKELGNCPV RQIGGCSFVY MRISNVYIVI VVSSNANVAC GFKFVVEAVA LFKSYFGGAF
101: DEDAIRNNFV LIYELLDEIM DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLAYKKNEV FLDIVESVNL LMSSKGNVLR
201: CDVTGKVLMK CFLSGMPDLK LGLNDKIGLE KESEMKSRPA KSGKTIELDD VTFHQCVNLT RFNSEKTVSF VPPDGEFELM KYRITEGVNL PFRVLPTIKE
301: LGRTRMEVNV KVKSVFGAKM FALGVVVKIP VPKQTAKTNF QVTTGRAKYN PSIDCLVWKI RKFPGQTEST LSAEIELIST MGEKKSWTRP PIQMEFQVPM
401: FTASGLRVRF LKVWEKSGYN TVEWVRYITK AGSYEIRC

Arabidopsis Description

Clathrin adaptor complexes medium subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4KHJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.