Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G24550.2 | Thale cress | cytosol | 83.87 | 40.35 |
| CDX92642 | Canola | cytosol | 85.25 | 39.87 |
| CDY34290 | Canola | cytosol | 82.95 | 39.74 |
| CDY03442 | Canola | cytosol | 82.03 | 39.29 |
| Bra019220.1-P | Field mustard | cytosol | 82.95 | 38.96 |
| CDY08937 | Canola | cytosol | 81.11 | 38.6 |
| CDY24840 | Canola | cytosol | 82.03 | 38.44 |
| GSMUA_Achr6P10200_001 | Banana | cytosol | 70.51 | 36.52 |
| GSMUA_Achr10P... | Banana | cytosol | 66.36 | 36.0 |
| KRH51806 | Soybean | cytosol | 62.67 | 35.32 |
| Solyc04g076230.2.1 | Tomato | cytosol | 72.81 | 34.96 |
| PGSC0003DMT400024188 | Potato | cytosol | 72.81 | 34.96 |
| KRH16840 | Soybean | cytosol | 71.89 | 34.51 |
| EER97557 | Sorghum | cytosol, peroxisome, plastid | 70.51 | 34.0 |
| TraesCS2B01G191200.1 | Wheat | golgi | 70.51 | 33.92 |
| TraesCS2D01G172100.1 | Wheat | peroxisome | 70.51 | 33.92 |
| Os07t0620300-01 | Rice | plasma membrane | 69.12 | 33.26 |
| KRH61131 | Soybean | cytosol, nucleus | 65.9 | 32.28 |
| KRH72454 | Soybean | cytosol | 58.06 | 31.27 |
| VIT_18s0001g13000.t01 | Wine grape | cytosol | 71.43 | 31.19 |
| HORVU2Hr1G030220.1 | Barley | cytosol, mitochondrion, peroxisome, plastid | 70.51 | 30.12 |
| CDX87692 | Canola | cytosol | 28.57 | 14.16 |
| CDY63050 | Canola | cytosol | 28.11 | 13.93 |
| CDY35171 | Canola | cytosol | 28.11 | 13.93 |
| CDY03204 | Canola | cytosol | 28.11 | 13.93 |
| CDX77680 | Canola | cytosol | 28.11 | 13.93 |
| CDY61312 | Canola | cytosol | 26.27 | 13.32 |
| CDY54239 | Canola | cytosol | 26.27 | 13.32 |
| CDY19316 | Canola | cytosol | 25.81 | 13.08 |
| CDX97909 | Canola | cytosol | 25.81 | 13.08 |
| CDY63681 | Canola | cytosol | 25.35 | 12.85 |
| CDY46183 | Canola | cytosol | 25.35 | 12.85 |
| CDY63680 | Canola | cytosol | 25.35 | 12.7 |
| CDY67244 | Canola | cytosol | 15.21 | 12.45 |
| CDX95277 | Canola | cytosol | 22.12 | 11.03 |
| Zm00001d002925_P002 | Maize | plastid | 69.59 | 10.76 |
| CDY41703 | Canola | cytosol | 22.12 | 10.64 |
Protein Annotations
| EnsemblPlants:CDY11020 | EnsemblPlantsGene:GSBRNA2T00048971001 | Gene3D:2.60.40.1170 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | InterPro:AP2_Mu_C_sf | InterPro:IPR028565 | InterPro:MHD | PANTHER:PTHR10529 |
| PANTHER:PTHR10529:SF270 | PFAM:PF00928 | PFscan:PS51072 | ProteinID:CDY11020 | ProteinID:CDY11020.1 | SUPFAM:SSF49447 |
| UniParc:UPI0004EEE2F1 | UniProt:A0A078F987 | MapMan:35.1 | : | : | : |
Description
BnaA03g46790DBnaA03g46790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F987]
Coordinates
chrLK032008:+:661151..662511
Molecular Weight (calculated)
24034.6 Da
IEP (calculated)
4.975
GRAVY (calculated)
-0.307
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQGAKRMPG TAVTKSVVAN DPGGRRREQI FVDIIEKISV TFSSSGYILT SEIDGTIQMK SYLSGNPEIR LALNEDLDIG RGGGVSVYEY RSSPGSGVIL
101: DDCNFHESVR LDSSVPPDGE FPVMNYRMTQ EFRPPFHVNT LIEEAGRLKA EVIIKIRAEF PSDIIANTIT VQMPLPNYTC RASFELEHDA VGQKTDFKES
201: SKMLECSLKK ASFESLS
101: DDCNFHESVR LDSSVPPDGE FPVMNYRMTQ EFRPPFHVNT LIEEAGRLKA EVIIKIRAEF PSDIIANTIT VQMPLPNYTC RASFELEHDA VGQKTDFKES
201: SKMLECSLKK ASFESLS
001: MMISQFFVLS QRGDNIVFRD YRAEVPKGST ETFFRKVKFW KEDGNAEAPP IFNVDGVNYF HVKVVGLYFV ATTRVNVSPS LVLELLQRIA RVIKDYLGVL
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKANCWRG
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKANCWRG
Arabidopsis Description
AP4MAP4M [Source:UniProtKB/TrEMBL;Acc:A0A178UX13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.